Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CO689_RS13110 | Genome accession | NZ_CP023497 |
| Coordinates | 2543302..2544276 (-) | Length | 324 a.a. |
| NCBI ID | WP_002481040.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain FDAARGOS_383 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2538302..2549276
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO689_RS13075 (CO689_13075) | gcvT | 2538792..2539886 (-) | 1095 | WP_002481033.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CO689_RS13080 (CO689_13080) | - | 2540065..2540604 (-) | 540 | WP_002481034.1 | shikimate kinase | - |
| CO689_RS13090 (CO689_13090) | comGF | 2540769..2541263 (-) | 495 | WP_002481036.1 | competence type IV pilus minor pilin ComGF | - |
| CO689_RS13095 (CO689_13095) | - | 2541482..2541892 (-) | 411 | WP_023015154.1 | hypothetical protein | - |
| CO689_RS13100 (CO689_13100) | comGC | 2541910..2542239 (-) | 330 | WP_002481038.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CO689_RS13105 (CO689_13105) | comGB | 2542257..2543330 (-) | 1074 | WP_002481039.1 | competence type IV pilus assembly protein ComGB | - |
| CO689_RS13110 (CO689_13110) | comGA | 2543302..2544276 (-) | 975 | WP_002481040.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CO689_RS13115 (CO689_13115) | - | 2544333..2544956 (-) | 624 | WP_002481041.1 | MBL fold metallo-hydrolase | - |
| CO689_RS13120 (CO689_13120) | - | 2544956..2545285 (-) | 330 | WP_002481042.1 | MTH1187 family thiamine-binding protein | - |
| CO689_RS13125 (CO689_13125) | - | 2545285..2546271 (-) | 987 | WP_002481043.1 | ROK family glucokinase | - |
| CO689_RS13130 (CO689_13130) | - | 2546271..2546471 (-) | 201 | WP_002481044.1 | YqgQ family protein | - |
| CO689_RS13135 (CO689_13135) | - | 2546455..2547912 (-) | 1458 | WP_002481045.1 | rhomboid family intramembrane serine protease | - |
| CO689_RS13140 (CO689_13140) | - | 2547925..2548467 (-) | 543 | WP_002481046.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| CO689_RS13145 (CO689_13145) | - | 2548614..2549051 (-) | 438 | WP_226956332.1 | transposase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36968.00 Da Isoelectric Point: 7.7580
>NTDB_id=247726 CO689_RS13110 WP_002481040.1 2543302..2544276(-) (comGA) [Staphylococcus simulans strain FDAARGOS_383]
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=247726 CO689_RS13110 WP_002481040.1 2543302..2544276(-) (comGA) [Staphylococcus simulans strain FDAARGOS_383]
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATAACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATAACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.991 |
99.691 |
0.608 |
| comGA | Staphylococcus aureus N315 |
60.991 |
99.691 |
0.608 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
38.245 |
98.457 |
0.377 |