Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   CO204_RS02970 Genome accession   NZ_CP023477
Coordinates   540307..541308 (+) Length   333 a.a.
NCBI ID   WP_002262797.1    Uniprot ID   A0AAX1K324
Organism   Streptococcus mutans strain LAR01     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 535307..546308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO204_RS02945 (CO204_02935) - 535314..535832 (+) 519 WP_002262792.1 hypothetical protein -
  CO204_RS02950 (CO204_02940) celB 535848..537206 (+) 1359 WP_002278509.1 PTS cellobiose transporter subunit IIC -
  CO204_RS02955 (CO204_02945) - 537471..538241 (+) 771 WP_032506302.1 carbonic anhydrase -
  CO204_RS02960 (CO204_02950) - 538368..538949 (+) 582 WP_019313353.1 CDP-archaeol synthase -
  CO204_RS02965 (CO204_02955) - 539065..540144 (-) 1080 WP_002266175.1 Xaa-Pro peptidase family protein -
  CO204_RS02970 (CO204_02960) ccpA 540307..541308 (+) 1002 WP_002262797.1 catabolite control protein A Regulator
  CO204_RS02975 (CO204_02965) - 541456..542916 (+) 1461 WP_002351419.1 alpha-amylase -
  CO204_RS02980 (CO204_02970) - 543026..544024 (+) 999 WP_002262799.1 glycosyltransferase -
  CO204_RS02985 (CO204_02975) - 544026..545360 (+) 1335 WP_002271828.1 glycosyltransferase family 4 protein -
  CO204_RS02990 (CO204_02980) - 545439..545630 (+) 192 WP_002266172.1 hypothetical protein -
  CO204_RS02995 (CO204_02985) - 545624..546262 (+) 639 WP_019313352.1 ATPase AAA -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36613.89 Da        Isoelectric Point: 6.8583

>NTDB_id=247412 CO204_RS02970 WP_002262797.1 540307..541308(+) (ccpA) [Streptococcus mutans strain LAR01]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPLIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=247412 CO204_RS02970 WP_002262797.1 540307..541308(+) (ccpA) [Streptococcus mutans strain LAR01]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCCTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.378

100

0.784

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment