Detailed information NTG0247027

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: CGZ65_RS09995
• Genome accession: NZ_CP023429
• Coordinates: 1970002..1970457 (+)
• Length: 151 a.a.
• NCBI ID: WP_096295702.1
• Uniprot ID: A0A3N4NC72
• Organism: Neisseria weixii strain 10022
• Function: DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1965002..1975457

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CGZ65_RS09980 (CGZ65_09980)	-	1965895..1967828 (-)	1934	Protein_2040	MacB family efflux pump subunit	-
CGZ65_RS09985 (CGZ65_09985)	-	1967931..1969109 (-)	1179	WP_096295700.1	efflux RND transporter periplasmic adaptor subunit	-
CGZ65_RS09990 (CGZ65_09990)	-	1969446..1969919 (+)	474	WP_096295701.1	type IV pilin protein	-
CGZ65_RS09995 (CGZ65_09995)	comP	1970002..1970457 (+)	456	WP_096295702.1	type IV pilin protein	Machinery gene
CGZ65_RS10000 (CGZ65_10000)	-	1970612..1971551 (-)	940	Protein_2044	transposase	-
CGZ65_RS10005 (CGZ65_10005)	pheA	1971695..1972777 (-)	1083	WP_096295703.1	prephenate dehydratase	-
CGZ65_RS10010 (CGZ65_10010)	-	1972938..1974173 (-)	1236	WP_096295704.1	multidrug effflux MFS transporter	-
CGZ65_RS10020 (CGZ65_10020)	-	1974978..1975232 (-)	255	WP_096295705.1	bacteriocin	-

Sequence

Protein

• Length: 151 a.a.
• Molecular weight: 16806.18 Da
• Isoelectric Point: 8.1079

>NTDB_id=247027 CGZ65_RS09995 WP_096295702.1 1970002..1970457(+) (comP) [Neisseria weixii strain 10022]
MRFSQSGFSLVQLLIVIAMLGILAAVAYPAYQIYIKKADLRAAQAALVQNGQFMERFYQQKGSFKQTSTTWPALPITATD
KFCIRPNNNARGAHDGKFTLKAVAFDSQNEPRVLKIDESLTTFICERSASSCDTDDAFFKGTDQDCSIYQP

Nucleotide

• Length: 456 bp

>NTDB_id=247027 CGZ65_RS09995 WP_096295702.1 1970002..1970457(+) (comP) [Neisseria weixii strain 10022]
ATGCGATTTTCACAATCCGGCTTTTCTCTCGTTCAGCTTTTAATTGTCATCGCTATGCTGGGCATCTTGGCTGCCGTCGC
CTATCCTGCTTATCAAATCTATATTAAAAAAGCAGATTTACGTGCTGCACAAGCTGCGTTGGTACAAAACGGTCAATTTA
TGGAGCGTTTTTACCAGCAAAAAGGCTCCTTCAAACAAACTTCAACCACCTGGCCTGCATTACCCATTACCGCTACCGAC
AAATTCTGCATACGCCCCAACAACAATGCCCGAGGCGCTCACGATGGAAAATTCACATTGAAAGCTGTTGCCTTCGATAG
CCAAAACGAACCGCGCGTATTGAAAATCGATGAATCGCTGACGACTTTTATCTGCGAACGTTCGGCCAGTTCATGTGACA
CTGACGATGCTTTTTTCAAAGGCACAGATCAAGATTGCAGCATTTATCAACCTTAA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (29-109)

• Prokaryotic N-terminal methylation motif (N_methyl) (4-28)

3D structure

• AlphaFold DB: A0A3N4NC72

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Neisseria meningitidis 8013	52.083	95.364	0.497
comP	Neisseria gonorrhoeae MS11	52.083	95.364	0.497
comP	Neisseria subflava NJ9703	49.306	95.364	0.47