Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   CMR26_RS14915 Genome accession   NZ_CP023414
Coordinates   3007281..3007400 (-) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain BS-37     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 3002281..3012400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CMR26_RS14890 (CMR26_14910) - 3002523..3003281 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  CMR26_RS14895 (CMR26_14915) - 3003275..3004222 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  CMR26_RS14900 (CMR26_14920) ceuB 3004212..3005165 (-) 954 WP_015239156.1 ABC transporter permease Machinery gene
  CMR26_RS14905 (CMR26_14925) - 3005579..3006943 (+) 1365 WP_020955323.1 aspartate kinase -
  CMR26_RS14910 (CMR26_14930) - 3007023..3007133 (+) 111 WP_369878517.1 YjcZ family sporulation protein -
  CMR26_RS14915 (CMR26_14935) phrC 3007281..3007400 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  CMR26_RS14920 (CMR26_14940) rapC 3007384..3008532 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  CMR26_RS14925 (CMR26_14945) - 3008685..3010118 (-) 1434 WP_162183162.1 sensor histidine kinase -
  CMR26_RS14930 (CMR26_14950) - 3010105..3010788 (-) 684 WP_042634825.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=246904 CMR26_RS14915 WP_003156334.1 3007281..3007400(-) (phrC) [Bacillus velezensis strain BS-37]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=246904 CMR26_RS14915 WP_003156334.1 3007281..3007400(-) (phrC) [Bacillus velezensis strain BS-37]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718

Multiple sequence alignment