Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CMR26_RS14900 Genome accession   NZ_CP023414
Coordinates   3004212..3005165 (-) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain BS-37     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2999212..3010165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CMR26_RS14880 (CMR26_14900) - 3000091..3001515 (+) 1425 WP_085341730.1 MDR family MFS transporter -
  CMR26_RS14885 (CMR26_14905) - 3001557..3002501 (-) 945 WP_025284230.1 siderophore ABC transporter substrate-binding protein -
  CMR26_RS14890 (CMR26_14910) - 3002523..3003281 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  CMR26_RS14895 (CMR26_14915) - 3003275..3004222 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  CMR26_RS14900 (CMR26_14920) ceuB 3004212..3005165 (-) 954 WP_015239156.1 ABC transporter permease Machinery gene
  CMR26_RS14905 (CMR26_14925) - 3005579..3006943 (+) 1365 WP_020955323.1 aspartate kinase -
  CMR26_RS14910 (CMR26_14930) - 3007023..3007133 (+) 111 WP_369878517.1 YjcZ family sporulation protein -
  CMR26_RS14915 (CMR26_14935) phrC 3007281..3007400 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  CMR26_RS14920 (CMR26_14940) rapC 3007384..3008532 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  CMR26_RS14925 (CMR26_14945) - 3008685..3010118 (-) 1434 WP_162183162.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=246903 CMR26_RS14900 WP_015239156.1 3004212..3005165(-) (ceuB) [Bacillus velezensis strain BS-37]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=246903 CMR26_RS14900 WP_015239156.1 3004212..3005165(-) (ceuB) [Bacillus velezensis strain BS-37]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGGAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATTGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCATGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGAGTGATTATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment