Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CLD04_RS02570 Genome accession   NZ_CP023257
Coordinates   484662..485612 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain TLO3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 479662..490612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CLD04_RS02545 (CLD04_02545) rapC 481121..482269 (+) 1149 WP_017696151.1 response regulator aspartate phosphatase RapC Regulator
  CLD04_RS02550 (CLD04_02550) phrC 482253..482375 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  CLD04_RS02555 (CLD04_02555) yczM 482475..482564 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  CLD04_RS02560 (CLD04_02560) yczN 482646..482759 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  CLD04_RS02565 (CLD04_02565) thrD 482913..484277 (-) 1365 WP_033883679.1 aspartate kinase -
  CLD04_RS02570 (CLD04_02570) ceuB 484662..485612 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  CLD04_RS02575 (CLD04_02575) yclO 485605..486552 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  CLD04_RS02580 (CLD04_02580) yclP 486546..487304 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  CLD04_RS02585 (CLD04_02585) yclQ 487326..488279 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  CLD04_RS02590 (CLD04_02590) cdaE 488326..489744 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=245519 CLD04_RS02570 WP_014475804.1 484662..485612(+) (ceuB) [Bacillus subtilis strain TLO3]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=245519 CLD04_RS02570 WP_014475804.1 484662..485612(+) (ceuB) [Bacillus subtilis strain TLO3]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment