Detailed information NTG0245517

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CLD04_RS02545
• Genome accession: NZ_CP023257
• Coordinates: 481121..482269 (+)
• Length: 382 a.a.
• NCBI ID: WP_017696151.1
• Uniprot ID: A0AAP2M3C2
• Organism: Bacillus subtilis strain TLO3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 476121..487269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLD04_RS02525 (CLD04_02525)	yclH	476491..477171 (-)	681	WP_015382762.1	ABC transporter ATP-binding protein	-
CLD04_RS02530 (CLD04_02530)	yclI	477187..478653 (-)	1467	WP_041336857.1	ABC transporter permease	-
CLD04_RS02535 (CLD04_02535)	yclJ	478866..479549 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
CLD04_RS02540 (CLD04_02540)	yclK	479536..480957 (+)	1422	WP_072557076.1	two-component system sensor histidine kinase YclK	-
CLD04_RS02545 (CLD04_02545)	rapC	481121..482269 (+)	1149	WP_017696151.1	response regulator aspartate phosphatase RapC	Regulator
CLD04_RS02550 (CLD04_02550)	phrC	482253..482375 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
CLD04_RS02555 (CLD04_02555)	yczM	482475..482564 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
CLD04_RS02560 (CLD04_02560)	yczN	482646..482759 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
CLD04_RS02565 (CLD04_02565)	thrD	482913..484277 (-)	1365	WP_033883679.1	aspartate kinase	-
CLD04_RS02570 (CLD04_02570)	ceuB	484662..485612 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
CLD04_RS02575 (CLD04_02575)	yclO	485605..486552 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45649.69 Da
• Isoelectric Point: 5.0423

>NTDB_id=245517 CLD04_RS02545 WP_017696151.1 481121..482269(+) (rapC) [Bacillus subtilis strain TLO3]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKRGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=245517 CLD04_RS02545 WP_017696151.1 481121..482269(+) (rapC) [Bacillus subtilis strain TLO3]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAATTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACTTTTGAAAGCAGCAGGATCGTCAATTCACTGCCGCAAGCATACTT
TTTAATTACCTTGATTTATTATAAACGGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACCTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.215	100	0.992
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568