Detailed information NTG0245139

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: CK945_RS20505
• Genome accession: NZ_CP023168
• Coordinates: 3940125..3941282 (-)
• Length: 385 a.a.
• NCBI ID: WP_020453119.1
• Uniprot ID: A0A6I7TVP7
• Organism: Bacillus paralicheniformis strain 14DA11
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3935125..3946282

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CK945_RS20475	-	3935366..3935785 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
CK945_RS20480	comFC	3935844..3936578 (-)	735	WP_096748349.1	double zinc ribbon domain-containing protein	Machinery gene
CK945_RS20485	-	3936535..3936819 (-)	285	WP_096748350.1	late competence development ComFB family protein	-
CK945_RS20490	comFA	3936874..3938268 (-)	1395	WP_096748475.1	DEAD/DEAH box helicase	Machinery gene
CK945_RS20495	-	3938392..3939234 (-)	843	WP_096748351.1	DegV family protein	-
CK945_RS20500	degU	3939354..3940043 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
CK945_RS20505	degS	3940125..3941282 (-)	1158	WP_020453119.1	sensor histidine kinase	Regulator
CK945_RS20510	-	3941505..3942143 (+)	639	WP_020453120.1	YigZ family protein	-
CK945_RS20515	-	3942158..3943237 (+)	1080	WP_020453121.1	LCP family protein	-
CK945_RS20520	-	3943290..3943673 (-)	384	WP_020453122.1	hypothetical protein	-
CK945_RS20525	-	3943782..3944846 (-)	1065	WP_020453123.1	glycosyltransferase family 4 protein	-
CK945_RS20530	tuaH	3944977..3946164 (-)	1188	WP_228119611.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44650.34 Da
• Isoelectric Point: 6.7862

>NTDB_id=245139 CK945_RS20505 WP_020453119.1 3940125..3941282(-) (degS) [Bacillus paralicheniformis strain 14DA11]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=245139 CK945_RS20505 WP_020453119.1 3940125..3941282(-) (degS) [Bacillus paralicheniformis strain 14DA11]
GTGAGTGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGATGGGAGCAAGGA
TGAGGTCTTTCAAATCGGAGAGCAGTCCCGTCAGCAATATGAAGGCTTGGTAGAAGAGCTGAAGCAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGAAACCGCTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGCCAGATTACCGTCGTCTTAAACTATTTAAATCAGGATCTGCGCCAGGTTGGCGTTCTCCTA
GAAGATGCGCAGGCCAAACAGGATTTCGGACTGCGGATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGCCCTGCGCAAATGCTGGCCAACGTCATGATGAGATCTGAGCTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAGAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATCCATTTCCAATGCATCGGAGAATCCGAAGATAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TTTTCCGGCTTGCACAGGAAGCAGTGACAAACGCCTTAAAACACTCCGAATCAACTGAGATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGTTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTTAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGTTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATTTTGATTAAAGTTCCGCTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A6I7TVP7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894