Detailed information NTG0244802

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: CK238_RS17820
• Genome accession: NZ_CP023075
• Coordinates: 3500709..3501872 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain K26
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3495709..3506872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CK238_RS17790 (CK238_17790)	-	3495974..3496393 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
CK238_RS17795 (CK238_17795)	comFC	3496467..3497156 (-)	690	WP_199803302.1	phosphoribosyltransferase family protein	Machinery gene
CK238_RS17800 (CK238_17800)	-	3497162..3497446 (-)	285	WP_022553866.1	competence protein ComFB	-
CK238_RS17805 (CK238_17805)	comFA	3497504..3498889 (-)	1386	WP_063636495.1	DEAD/DEAH box helicase	Machinery gene
CK238_RS17810 (CK238_17810)	-	3498997..3499845 (-)	849	WP_003151387.1	DegV family protein	-
CK238_RS17815 (CK238_17815)	degU	3499943..3500632 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
CK238_RS17820 (CK238_17820)	degS	3500709..3501872 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
CK238_RS17825 (CK238_17825)	-	3502095..3502742 (+)	648	WP_063636496.1	YigZ family protein	-
CK238_RS17830 (CK238_17830)	-	3502747..3503940 (+)	1194	WP_017418814.1	LCP family protein	-
CK238_RS17835 (CK238_17835)	-	3504040..3505116 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
CK238_RS17840 (CK238_17840)	-	3505248..3506444 (-)	1197	WP_017418813.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=244802 CK238_RS17820 WP_003151385.1 3500709..3501872(-) (degS) [Bacillus velezensis strain K26]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=244802 CK238_RS17820 WP_003151385.1 3500709..3501872(-) (degS) [Bacillus velezensis strain K26]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTCCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948