Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   CK496_RS04920 Genome accession   NZ_CP023074
Coordinates   1015016..1016284 (+) Length   422 a.a.
NCBI ID   WP_095803543.1    Uniprot ID   -
Organism   Enterococcus thailandicus strain a523     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1010016..1021284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CK496_RS04895 (CK496_04895) tsf 1010625..1011506 (+) 882 WP_067484209.1 translation elongation factor Ts -
  CK496_RS04900 (CK496_04900) pyrH 1011644..1012366 (+) 723 WP_067484211.1 UMP kinase -
  CK496_RS04905 (CK496_04905) frr 1012369..1012926 (+) 558 WP_067484213.1 ribosome recycling factor -
  CK496_RS04910 (CK496_04910) - 1013118..1013930 (+) 813 WP_071868517.1 isoprenyl transferase -
  CK496_RS04915 (CK496_04915) - 1013927..1014727 (+) 801 WP_067484217.1 phosphatidate cytidylyltransferase -
  CK496_RS04920 (CK496_04920) eeP 1015016..1016284 (+) 1269 WP_095803543.1 RIP metalloprotease RseP Regulator
  CK496_RS04925 (CK496_04925) - 1016351..1018060 (+) 1710 WP_067484220.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45954.56 Da        Isoelectric Point: 5.2522

>NTDB_id=244707 CK496_RS04920 WP_095803543.1 1015016..1016284(+) (eeP) [Enterococcus thailandicus strain a523]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLSLNSDGIVEKINLSKKVQLTNGIPVELVRYDLEDELTITAFVNGDDTEAVTYPVDHDATIIEADGTEIRIAPRD
VQFQSAKLWQRMLTNFAGPMNNFILAIFLFIVLAFMQGGIQVTNTNQIGAVLPDGAAEVAGLKENDHILSINDKKITSWT
DLTSQITANPGKKLNFEVQRDGKVQDIEVTPKSVESNGQKVGQLGIQAPMKTGFIDKIVGGTKQAFSSSLEIFKALGSLF
TGFSLNKLGGPVMMFQLSSEAASQGMMTVIGLMAMLSMNLGIVNLLPIPALDGGKLVLNVIEGVRGKPLSQDKEGILTLI
GFGFLMLLMILVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=244707 CK496_RS04920 WP_095803543.1 1015016..1016284(+) (eeP) [Enterococcus thailandicus strain a523]
ATGAAAACGATTCTAACTTTTATCATCGTTTTTGGTATTTTGGTTATTGTCCACGAATTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTAGTCCGAGAATTTGCAATTGGTATGGGTCCAAAAATTTATGGACATCAAGCTAAAGATGGAACGA
CATATACACTTCGGTTATTACCGATTGGTGGTTATGTAAGAATGGCAGGCAACGGCGATGATGAGACAGAGATGGCCCCA
GGAATGCCACTATCGCTTTCACTCAATTCTGATGGTATCGTAGAGAAAATCAACTTAAGTAAAAAAGTTCAACTAACGAA
TGGAATTCCAGTGGAACTTGTTCGTTACGATCTAGAGGACGAGCTGACAATTACAGCTTTTGTTAACGGCGATGATACGG
AGGCTGTGACTTACCCAGTAGATCATGATGCCACAATTATTGAGGCAGATGGAACAGAAATTCGAATTGCACCAAGAGAT
GTTCAGTTTCAATCAGCAAAATTATGGCAACGTATGTTAACTAACTTTGCTGGACCGATGAATAACTTTATTTTAGCGAT
TTTTTTGTTCATTGTGCTTGCATTCATGCAAGGAGGCATTCAGGTAACAAATACGAATCAAATTGGTGCAGTACTTCCTG
ATGGTGCAGCCGAGGTAGCTGGCTTAAAGGAAAATGACCATATCCTAAGTATTAATGATAAAAAAATCACGTCGTGGACT
GATTTAACAAGTCAAATTACTGCAAACCCTGGAAAAAAATTGAATTTTGAAGTTCAACGTGATGGAAAAGTTCAAGACAT
TGAAGTGACACCTAAATCAGTAGAATCAAATGGGCAAAAAGTTGGACAGCTTGGTATACAAGCACCGATGAAAACTGGTT
TTATTGATAAAATCGTTGGTGGAACGAAACAAGCTTTCAGTAGTTCATTAGAAATCTTCAAAGCGCTGGGATCACTATTT
ACAGGATTTAGTTTGAATAAACTAGGCGGTCCAGTGATGATGTTCCAATTATCTTCTGAAGCAGCTAGTCAAGGAATGAT
GACTGTTATTGGGCTAATGGCGATGCTTTCAATGAACTTAGGGATTGTGAATCTATTGCCAATTCCAGCACTTGATGGCG
GTAAGTTGGTATTAAATGTCATTGAAGGTGTACGTGGCAAACCATTGAGTCAAGATAAAGAAGGAATCTTAACTTTGATT
GGGTTTGGTTTCTTGATGCTATTGATGATTTTAGTGACATGGAATGATATTCAACGATTCTTTTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(199-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

54.907

100

0.557
  eeP Streptococcus thermophilus LMG 18311

54.673

100

0.555

Multiple sequence alignment