Detailed information NTG0244372

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: Aba5845_RS16930
• Genome accession: NZ_CP023034
• Coordinates: 3504911..3505969 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain 5845
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3499911..3510969

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Aba5845_RS16915 (Aba5845_16910)	-	3501016..3501348 (+)	333	WP_000169594.1	hypothetical protein	-
Aba5845_RS16920 (Aba5845_16915)	-	3501351..3502175 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
Aba5845_RS16925 (Aba5845_16920)	ponA	3502193..3504748 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
Aba5845_RS16930 (Aba5845_16925)	pilM	3504911..3505969 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
Aba5845_RS16935 (Aba5845_16930)	pilN	3505969..3506610 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
Aba5845_RS16940 (Aba5845_16935)	pilO	3506607..3507347 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
Aba5845_RS16945 (Aba5845_16940)	pilP	3507358..3507885 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
Aba5845_RS16950 (Aba5845_16945)	pilQ	3507953..3510118 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
Aba5845_RS16955 (Aba5845_16950)	aroK	3510130..3510699 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=244372 Aba5845_RS16930 WP_002014066.1 3504911..3505969(+) (pilM) [Acinetobacter baumannii strain 5845]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=244372 Aba5845_RS16930 WP_002014066.1 3504911..3505969(+) (pilM) [Acinetobacter baumannii strain 5845]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423