Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | CJZ71_RS03160 | Genome accession | NZ_CP022891 |
| Coordinates | 543758..544795 (-) | Length | 345 a.a. |
| NCBI ID | WP_031600685.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain DKU_NT_03 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 538758..549795
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJZ71_RS03110 (CJZ71_03110) | tasA | 538856..539641 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| CJZ71_RS03115 (CJZ71_03115) | sipW | 539705..540277 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| CJZ71_RS03120 (CJZ71_03120) | tapA | 540261..541022 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| CJZ71_RS03125 (CJZ71_03125) | yqzG | 541294..541620 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| CJZ71_RS03130 (CJZ71_03130) | spoIITA | 541662..541841 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| CJZ71_RS03135 (CJZ71_03135) | comGG | 541912..542286 (-) | 375 | WP_069837632.1 | ComG operon protein ComGG | Machinery gene |
| CJZ71_RS03140 (CJZ71_03140) | comGF | 542287..542670 (-) | 384 | WP_029317913.1 | ComG operon protein ComGF | Machinery gene |
| CJZ71_RS03145 (CJZ71_03145) | comGE | 542696..543043 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| CJZ71_RS03150 (CJZ71_03150) | comGD | 543027..543458 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| CJZ71_RS03155 (CJZ71_03155) | comGC | 543448..543744 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| CJZ71_RS03160 (CJZ71_03160) | comGB | 543758..544795 (-) | 1038 | WP_031600685.1 | comG operon protein ComGB | Machinery gene |
| CJZ71_RS03165 (CJZ71_03165) | comGA | 544782..545852 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| CJZ71_RS03170 (CJZ71_03170) | - | 546064..546261 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| CJZ71_RS03175 (CJZ71_03175) | corA | 546263..547216 (-) | 954 | WP_014480260.1 | magnesium transporter CorA | - |
| CJZ71_RS03180 (CJZ71_03180) | yqhB | 547358..548686 (+) | 1329 | WP_014480261.1 | hemolysin family protein | - |
| CJZ71_RS03185 (CJZ71_03185) | rsbRD | 548739..549575 (-) | 837 | WP_014480262.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39592.99 Da Isoelectric Point: 9.6259
>NTDB_id=242609 CJZ71_RS03160 WP_031600685.1 543758..544795(-) (comGB) [Bacillus subtilis strain DKU_NT_03]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=242609 CJZ71_RS03160 WP_031600685.1 543758..544795(-) (comGB) [Bacillus subtilis strain DKU_NT_03]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGTGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGTGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |