Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | CJZ71_RS03105 | Genome accession | NZ_CP022891 |
| Coordinates | 538428..538763 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain DKU_NT_03 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 533428..543763
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJZ71_RS03085 (CJZ71_03085) | gcvT | 534021..535109 (-) | 1089 | WP_017696204.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CJZ71_RS03090 (CJZ71_03090) | hepAA | 535550..537223 (+) | 1674 | WP_038829735.1 | SNF2-related protein | - |
| CJZ71_RS03095 (CJZ71_03095) | yqhG | 537244..538038 (+) | 795 | WP_014480249.1 | YqhG family protein | - |
| CJZ71_RS03100 (CJZ71_03100) | sinI | 538221..538394 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| CJZ71_RS03105 (CJZ71_03105) | sinR | 538428..538763 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| CJZ71_RS03110 (CJZ71_03110) | tasA | 538856..539641 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| CJZ71_RS03115 (CJZ71_03115) | sipW | 539705..540277 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| CJZ71_RS03120 (CJZ71_03120) | tapA | 540261..541022 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| CJZ71_RS03125 (CJZ71_03125) | yqzG | 541294..541620 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| CJZ71_RS03130 (CJZ71_03130) | spoIITA | 541662..541841 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| CJZ71_RS03135 (CJZ71_03135) | comGG | 541912..542286 (-) | 375 | WP_069837632.1 | ComG operon protein ComGG | Machinery gene |
| CJZ71_RS03140 (CJZ71_03140) | comGF | 542287..542670 (-) | 384 | WP_029317913.1 | ComG operon protein ComGF | Machinery gene |
| CJZ71_RS03145 (CJZ71_03145) | comGE | 542696..543043 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| CJZ71_RS03150 (CJZ71_03150) | comGD | 543027..543458 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| CJZ71_RS03155 (CJZ71_03155) | comGC | 543448..543744 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=242603 CJZ71_RS03105 WP_003226345.1 538428..538763(+) (sinR) [Bacillus subtilis strain DKU_NT_03]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=242603 CJZ71_RS03105 WP_003226345.1 538428..538763(+) (sinR) [Bacillus subtilis strain DKU_NT_03]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |