Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   CJZ70_RS01145 Genome accession   NZ_CP022890
Coordinates   233571..233690 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain DKU_NT_02     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 228571..238690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ70_RS01125 (CJZ70_01125) pbpG 228941..231016 (-) 2076 WP_014481227.1 transglycosylase domain-containing protein -
  CJZ70_RS01130 (CJZ70_01130) speE 231218..232048 (+) 831 WP_003227543.1 spermidine synthase -
  CJZ70_RS01135 (CJZ70_01135) speB 232109..232981 (+) 873 WP_003227545.1 agmatinase -
  CJZ70_RS01140 (CJZ70_01140) - 233046..233473 (-) 428 Protein_229 YbaK/EbsC family protein -
  CJZ70_RS01145 (CJZ70_01145) phrF 233571..233690 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  CJZ70_RS01150 (CJZ70_01150) rapF 233674..234819 (-) 1146 WP_069837832.1 response regulator aspartate phosphatase RapF Regulator
  CJZ70_RS21765 (CJZ70_01155) - 234822..235052 (+) 231 Protein_232 hypothetical protein -
  CJZ70_RS01160 (CJZ70_01160) ywhK 235049..236400 (+) 1352 Protein_233 YncE family protein -
  CJZ70_RS01165 (CJZ70_01165) ywhL 236439..237815 (+) 1377 WP_069837831.1 YncE family protein -
  CJZ70_RS01170 (CJZ70_01170) albG 237821..238522 (-) 702 WP_069837830.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=242520 CJZ70_RS01145 WP_009968329.1 233571..233690(-) (phrF) [Bacillus subtilis strain DKU_NT_02]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=242520 CJZ70_RS01145 WP_009968329.1 233571..233690(-) (phrF) [Bacillus subtilis strain DKU_NT_02]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment