Detailed information NTG0242521

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: CJZ70_RS01150
• Genome accession: NZ_CP022890
• Coordinates: 233674..234819 (-)
• Length: 381 a.a.
• NCBI ID: WP_069837832.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DKU_NT_02
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 228674..239819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJZ70_RS01125 (CJZ70_01125)	pbpG	228941..231016 (-)	2076	WP_014481227.1	transglycosylase domain-containing protein	-
CJZ70_RS01130 (CJZ70_01130)	speE	231218..232048 (+)	831	WP_003227543.1	spermidine synthase	-
CJZ70_RS01135 (CJZ70_01135)	speB	232109..232981 (+)	873	WP_003227545.1	agmatinase	-
CJZ70_RS01140 (CJZ70_01140)	-	233046..233473 (-)	428	Protein_229	YbaK/EbsC family protein	-
CJZ70_RS01145 (CJZ70_01145)	phrF	233571..233690 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
CJZ70_RS01150 (CJZ70_01150)	rapF	233674..234819 (-)	1146	WP_069837832.1	response regulator aspartate phosphatase RapF	Regulator
CJZ70_RS21765 (CJZ70_01155)	-	234822..235052 (+)	231	Protein_232	hypothetical protein	-
CJZ70_RS01160 (CJZ70_01160)	ywhK	235049..236400 (+)	1352	Protein_233	YncE family protein	-
CJZ70_RS01165 (CJZ70_01165)	ywhL	236439..237815 (+)	1377	WP_069837831.1	YncE family protein	-
CJZ70_RS01170 (CJZ70_01170)	albG	237821..238522 (-)	702	WP_069837830.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
CJZ70_RS01175 (CJZ70_01175)	albF	238519..239799 (-)	1281	WP_095010543.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45624.07 Da
• Isoelectric Point: 5.0624

>NTDB_id=242521 CJZ70_RS01150 WP_069837832.1 233674..234819(-) (rapF) [Bacillus subtilis strain DKU_NT_02]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFTIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=242521 CJZ70_RS01150 WP_069837832.1 233674..234819(-) (rapF) [Bacillus subtilis strain DKU_NT_02]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACAGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCACTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57