Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ssp1_RS01245 Genome accession   NZ_CP022881
Coordinates   274311..274976 (+) Length   221 a.a.
NCBI ID   WP_075778257.1    Uniprot ID   -
Organism   Staphylococcus sp. M0911     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 269311..279976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ssp1_RS01225 (Ssp1_02480) - 269909..270358 (+) 450 WP_002452056.1 helix-turn-helix domain-containing protein -
  ssp1_RS01230 (Ssp1_02490) - 270689..272059 (+) 1371 WP_240328892.1 poly-gamma-glutamate hydrolase family protein -
  ssp1_RS01235 (Ssp1_02500) - 272238..272339 (+) 102 WP_015364644.1 SE2200 family small protein -
  ssp1_RS01240 (Ssp1_02510) - 272422..273876 (-) 1455 WP_075778258.1 alkaline phosphatase -
  ssp1_RS11875 (Ssp1_02520) - 274131..274289 (+) 159 WP_002452059.1 hypothetical protein -
  ssp1_RS01245 (Ssp1_02530) braR 274311..274976 (+) 666 WP_075778257.1 response regulator transcription factor Regulator
  ssp1_RS01250 (Ssp1_02540) braS 274982..275878 (+) 897 WP_075778256.1 sensor histidine kinase Regulator
  ssp1_RS01255 (Ssp1_02550) - 275982..276728 (+) 747 WP_075778255.1 ABC transporter ATP-binding protein -
  ssp1_RS11990 - 276746..277039 (+) 294 WP_240328893.1 hypothetical protein -
  ssp1_RS01260 (Ssp1_02560) - 277212..278741 (+) 1530 WP_240328894.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25431.47 Da        Isoelectric Point: 4.9540

>NTDB_id=242459 ssp1_RS01245 WP_075778257.1 274311..274976(+) (braR) [Staphylococcus sp. M0911]
MKILIVEDDLVIAESLANELKNWNYDVKLAKQFSHILDDFKSYLPDLVLLDINLPTLNGFHWCQEIRKISNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKVQALLRRTYDLAVSNNELNVKGCQLIADEAKLMFQGEVTQLSLTELQIIK
LLFQNEGKFVNRTALIEKCWESENYIDDNTLAVNMTRLRKKLNQIGLTDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=242459 ssp1_RS01245 WP_075778257.1 274311..274976(+) (braR) [Staphylococcus sp. M0911]
ATGAAGATTTTGATAGTAGAAGATGACTTAGTCATTGCAGAAAGTTTAGCAAATGAACTTAAGAATTGGAACTATGACGT
TAAGTTGGCAAAACAGTTTTCTCATATTTTAGATGATTTCAAAAGCTATCTACCTGACTTAGTACTACTAGATATTAATT
TACCTACTTTAAATGGATTCCATTGGTGCCAAGAAATTAGAAAAATATCAAACGTACCTATTATATTTATCAGTTCACGG
ACGGATAATATGGATCAAATTATGGCGATTCAAATGGGTGGCGATGATTTTATTGAGAAACCATTCAATTTATCATTAAC
AGTTGCAAAAGTACAAGCTTTATTACGACGAACTTATGATTTAGCTGTATCCAATAACGAATTAAATGTTAAAGGATGTC
AACTGATTGCTGATGAGGCAAAGTTAATGTTCCAAGGTGAGGTGACACAACTGTCTTTAACGGAACTTCAAATCATTAAA
CTGTTGTTTCAAAATGAAGGGAAATTTGTGAATCGAACAGCTCTGATTGAAAAATGTTGGGAATCAGAAAATTATATTGA
TGATAATACTTTGGCAGTGAACATGACTCGATTACGAAAAAAATTAAATCAAATTGGCTTAACAGATTTTATTGAAACGA
AGAAAAATGTGGGTTATAGGGTGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.638

100

0.796

Multiple sequence alignment