Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   ssp1_RS01250 Genome accession   NZ_CP022881
Coordinates   274982..275878 (+) Length   298 a.a.
NCBI ID   WP_075778256.1    Uniprot ID   -
Organism   Staphylococcus sp. M0911     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 269982..280878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ssp1_RS01230 (Ssp1_02490) - 270689..272059 (+) 1371 WP_240328892.1 poly-gamma-glutamate hydrolase family protein -
  ssp1_RS01235 (Ssp1_02500) - 272238..272339 (+) 102 WP_015364644.1 SE2200 family small protein -
  ssp1_RS01240 (Ssp1_02510) - 272422..273876 (-) 1455 WP_075778258.1 alkaline phosphatase -
  ssp1_RS11875 (Ssp1_02520) - 274131..274289 (+) 159 WP_002452059.1 hypothetical protein -
  ssp1_RS01245 (Ssp1_02530) braR 274311..274976 (+) 666 WP_075778257.1 response regulator transcription factor Regulator
  ssp1_RS01250 (Ssp1_02540) braS 274982..275878 (+) 897 WP_075778256.1 sensor histidine kinase Regulator
  ssp1_RS01255 (Ssp1_02550) - 275982..276728 (+) 747 WP_075778255.1 ABC transporter ATP-binding protein -
  ssp1_RS11990 - 276746..277039 (+) 294 WP_240328893.1 hypothetical protein -
  ssp1_RS01260 (Ssp1_02560) - 277212..278741 (+) 1530 WP_240328894.1 FtsX-like permease family protein -
  ssp1_RS01265 (Ssp1_02580) - 278864..280174 (+) 1311 WP_240328895.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34414.00 Da        Isoelectric Point: 5.9617

>NTDB_id=242460 ssp1_RS01250 WP_075778256.1 274982..275878(+) (braS) [Staphylococcus sp. M0911]
MLLTFIKSIKNEIAIVTFISLLFVLIFFVFSLPKSALILGVAIILFIMCIYWWISYLGFQKEERLKEKVVSLEEELFEMK
NKQIEYRKDVESYFLTWVHQIKTPITASQLLLERNEPNVVNQVRQEIVQIDNYTRLALSYLKLLNEASDMTITEVTIDDL
IKPLIMKYRIHFIEQHTKIHYQSIDNSVLTDAQWTSILIEQILNNALKYARGKDIWIDFDSTSQQLCIKDNGIGISQADL
PKIFDKGYSGYNGSLNDSSSGIGLFIVKHIAQHLNLNVEVTSELNKGTQFTISFPMQS

Nucleotide


Download         Length: 897 bp        

>NTDB_id=242460 ssp1_RS01250 WP_075778256.1 274982..275878(+) (braS) [Staphylococcus sp. M0911]
ATGTTACTAACGTTTATTAAATCAATTAAAAATGAAATAGCGATTGTTACTTTCATATCCTTACTATTTGTACTCATTTT
CTTCGTTTTTTCACTCCCTAAAAGTGCGTTAATACTAGGTGTAGCAATCATTTTATTTATTATGTGTATTTATTGGTGGA
TCAGTTATTTAGGTTTTCAAAAAGAAGAAAGACTTAAAGAAAAAGTAGTGTCACTCGAAGAAGAACTATTTGAAATGAAA
AACAAGCAAATTGAATATCGTAAAGATGTTGAAAGTTATTTCTTAACCTGGGTACATCAAATCAAAACGCCTATCACTGC
ATCGCAACTATTACTAGAGCGTAATGAACCTAATGTTGTCAATCAAGTGAGACAAGAAATTGTACAAATTGATAATTATA
CCCGCTTAGCACTCAGTTATTTAAAACTACTTAATGAAGCGTCTGATATGACAATCACCGAGGTGACTATAGATGATTTA
ATTAAACCCTTAATCATGAAATATCGTATTCACTTTATAGAACAACACACTAAAATTCATTACCAATCTATTGATAATAG
CGTCTTAACAGATGCACAATGGACTTCAATATTGATAGAACAGATACTAAATAACGCATTAAAGTATGCACGTGGAAAAG
ATATATGGATTGACTTTGATTCAACTTCTCAACAATTATGTATTAAAGATAACGGTATTGGTATTAGCCAAGCAGACTTG
CCGAAAATCTTTGACAAAGGATATTCTGGTTACAATGGTAGCCTCAATGACTCCTCAAGTGGCATTGGATTGTTTATCGT
TAAACATATTGCGCAACATCTGAATTTAAATGTTGAAGTGACATCAGAATTGAATAAAGGCACACAATTTACAATTAGCT
TTCCAATGCAAAGCTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(198-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

62.457

98.322

0.614

Multiple sequence alignment