Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   CGP83_RS04825 Genome accession   NZ_CP022717
Coordinates   956970..957956 (+) Length   328 a.a.
NCBI ID   WP_000959278.1    Uniprot ID   A0A6B5F529
Organism   Staphylococcus aureus strain 27     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 951970..962956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGP83_RS04800 (CGP83_00882) opp4B 952173..953135 (+) 963 WP_115288371.1 oligopeptide ABC transporter permease -
  CGP83_RS04805 (CGP83_00883) opp4C 953147..954028 (+) 882 WP_001180269.1 oligopeptide ABC transporter permease -
  CGP83_RS04810 (CGP83_00884) trpS 954070..955059 (-) 990 WP_000448929.1 tryptophan--tRNA ligase -
  CGP83_RS04815 (CGP83_00885) spxA 955354..955749 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  CGP83_RS04820 (CGP83_00886) mecA 956130..956849 (+) 720 WP_001217727.1 adaptor protein MecA -
  CGP83_RS04825 (CGP83_00887) coiA 956970..957956 (+) 987 WP_000959278.1 competence protein CoiA family protein Machinery gene
  CGP83_RS04830 (CGP83_00888) pepF 958004..959812 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  CGP83_RS04835 (CGP83_00889) yjbH 960273..961079 (-) 807 WP_000896694.1 protease adaptor protein YjbH -
  CGP83_RS04840 (CGP83_00890) - 961102..961467 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  CGP83_RS04845 (CGP83_00891) - 961571..962164 (-) 594 WP_000224616.1 CYTH domain-containing protein -
  CGP83_RS04850 (CGP83_00892) - 962350..962697 (+) 348 WP_001242107.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38679.31 Da        Isoelectric Point: 9.5882

>NTDB_id=241851 CGP83_RS04825 WP_000959278.1 956970..957956(+) (coiA) [Staphylococcus aureus strain 27]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTVQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALDSKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=241851 CGP83_RS04825 WP_000959278.1 956970..957956(+) (coiA) [Staphylococcus aureus strain 27]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTTAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTTG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGTTCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGATAGCAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterProScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.646

100

0.966
  coiA Staphylococcus aureus MW2

96.646

100

0.966

Multiple sequence alignment