Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   CHF41_RS08900 Genome accession   NZ_CP022680
Coordinates   1848632..1849435 (-) Length   267 a.a.
NCBI ID   WP_119876937.1    Uniprot ID   -
Organism   Streptococcus respiraculi strain HTS25     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1843632..1854435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHF41_RS08890 pbp2b 1844503..1846578 (-) 2076 WP_162911940.1 penicillin-binding protein PBP2B -
  CHF41_RS08895 abc-f 1846654..1848048 (-) 1395 WP_119876936.1 ribosomal protection-like ABC-F family protein -
  CHF41_RS08900 vicX 1848632..1849435 (-) 804 WP_119876937.1 MBL fold metallo-hydrolase Regulator
  CHF41_RS08905 micB 1849442..1850794 (-) 1353 WP_119876938.1 cell wall metabolism sensor histidine kinase VicK Regulator
  CHF41_RS08910 micA 1850787..1851491 (-) 705 WP_119876939.1 response regulator YycF Regulator
  CHF41_RS08915 - 1852119..1852742 (-) 624 WP_119876940.1 TetR/AcrR family transcriptional regulator -
  CHF41_RS08920 - 1852843..1853475 (+) 633 WP_119876941.1 HXXEE domain-containing protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29553.41 Da        Isoelectric Point: 5.3549

>NTDB_id=241588 CHF41_RS08900 WP_119876937.1 1848632..1849435(-) (vicX) [Streptococcus respiraculi strain HTS25]
MGETGFRYSILASGSSGNSFYLETEKKKILVDAGLSGKKITSLLAEIGRRPEDLDAILVTHEHSDHIHGIGVLARKYGMD
IYANEATWQAMEGKLGKISLEQKHIFELGVTKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRLAGIV
ENADGYLIESNHDVEILRAGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQIYDTSPDTATPLTEI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=241588 CHF41_RS08900 WP_119876937.1 1848632..1849435(-) (vicX) [Streptococcus respiraculi strain HTS25]
ATGGGAGAAACAGGTTTTCGATATAGTATTTTAGCCTCTGGTTCGAGTGGAAATTCCTTCTATTTAGAAACAGAGAAGAA
AAAGATTTTGGTGGACGCAGGCTTGTCGGGCAAGAAAATCACCAGTTTGCTGGCAGAAATTGGCCGCAGACCGGAGGATT
TGGATGCCATTTTAGTTACGCACGAGCATAGCGATCATATTCACGGGATTGGCGTTCTAGCTCGTAAATATGGCATGGAC
ATTTATGCTAACGAAGCGACCTGGCAGGCTATGGAGGGAAAGCTAGGAAAGATTTCCCTTGAGCAAAAGCATATTTTTGA
GTTGGGTGTGACCAAGACCTTTGGGGACTTGGACATTGAAAGTTTCGGGGTCAGCCATGATGCGGCTTGTCCACAATTTT
ACCGCTTTATGAAAGATGACAAGAGCTTTGTCATGTTGACGGATACGGGCTATGTCAGTGACCGCCTGGCAGGGATTGTG
GAAAATGCGGACGGGTACCTGATTGAGTCCAACCACGATGTGGAAATCTTGCGGGCGGGTTCTTATTCATGGAATCTCAA
GCAGCGTATTTTGTCCGATAAGGGACACCTTTGTAACGAGGACGGCGCAGATGCCATGATTCGCTCACTTGGAAATCGGA
CCAAGAAGATTTACCTTGGTCACCTCAGCAAGGAGAACAACATCAAGGAACTAGCCCACATGACCATGGTCAATCAGCTG
GCTCAAGCGGATTTGGGAGTTGGCGTTGACTTCCAAATATATGATACATCGCCAGACACTGCTACACCCTTAACGGAGAT
ATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-211)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.903

100

0.779

Multiple sequence alignment