Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   CHN56_RS15605 Genome accession   NZ_CP022654
Coordinates   3112244..3114535 (+) Length   763 a.a.
NCBI ID   WP_094247540.1    Uniprot ID   -
Organism   Bacillus velezensis strain SCDB 291     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3107244..3119535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHN56_RS15575 (CHN56_03082) - 3108829..3110052 (+) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  CHN56_RS15580 (CHN56_03083) - 3110059..3110400 (-) 342 WP_014418765.1 hypothetical protein -
  CHN56_RS15590 (CHN56_03084) degQ 3110865..3111005 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  CHN56_RS15595 (CHN56_03085) - 3111157..3112068 (+) 912 WP_031378407.1 polyprenyl synthetase family protein -
  CHN56_RS15600 (CHN56_03086) comX 3112068..3112232 (+) 165 WP_007613432.1 competence pheromone ComX -
  CHN56_RS15605 (CHN56_03087) comP 3112244..3114535 (+) 2292 WP_094247540.1 histidine kinase Regulator
  CHN56_RS15610 (CHN56_03088) comA 3114616..3115260 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  CHN56_RS15615 (CHN56_03089) - 3115282..3115665 (+) 384 WP_003152054.1 hotdog fold thioesterase -
  CHN56_RS15620 (CHN56_03090) mnhG 3115705..3116079 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  CHN56_RS15625 (CHN56_03091) - 3116063..3116347 (-) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  CHN56_RS15630 (CHN56_03092) - 3116347..3116823 (-) 477 WP_071392239.1 Na+/H+ antiporter subunit E -
  CHN56_RS15635 (CHN56_03093) - 3116829..3118310 (-) 1482 WP_094247541.1 Na+/H+ antiporter subunit D -
  CHN56_RS15640 (CHN56_03094) - 3118303..3118644 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  CHN56_RS15645 (CHN56_03095) - 3118644..3119075 (-) 432 WP_077722765.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88385.59 Da        Isoelectric Point: 7.3985

>NTDB_id=241329 CHN56_RS15605 WP_094247540.1 3112244..3114535(+) (comP) [Bacillus velezensis strain SCDB 291]
MKSKYNKISVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINGQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=241329 CHN56_RS15605 WP_094247540.1 3112244..3114535(+) (comP) [Bacillus velezensis strain SCDB 291]
ATGAAGTCCAAGTACAATAAGATTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACCATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACGGCCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCGATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCATCATCA
AGATAAATGAAGAAAAAAACTTGAAATCTGCTTTGGTGCTAATTGTATTTCTTTTGTCTGCTTCAATCGCATATATCAGT
GCTGGAGGATCGGCAAAAGGTGATTTGCTTAGCAGATGCATTATGTTGTTAACATTAATAACTGTACCTTTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTCGTTTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCGATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTGATTGTAGCATATTACTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCAGGCACATATTAT
AAAGGTGCTCGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCGTATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTGATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCGTTAACCCCAACTATAATTCTGGT
TACGACAATTGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTCAAACTGACATTTTTAATTTATATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCTGAAAGATTCAATTACCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACCACCATTCT
CGAAGTCACTCTTACAAGTAAAGTGTATATATTTGAAGTTACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTGTTGAAATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCCCGTTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAA
AAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAAGAGCCCTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCG
GTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAA
GAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAAAAT
CGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

54.026

100

0.545

Multiple sequence alignment