Detailed information NTG0241322

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: CHN56_RS13585
• Genome accession: NZ_CP022654
• Coordinates: 2724355..2725518 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SCDB 291
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2719355..2730518

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CHN56_RS13565 (CHN56_02688)	-	2719810..2721006 (+)	1197	WP_094247452.1	glycosyltransferase	-
CHN56_RS13570 (CHN56_02689)	-	2721139..2722215 (+)	1077	WP_003151382.1	MraY family glycosyltransferase	-
CHN56_RS13575 (CHN56_02690)	-	2722305..2723480 (-)	1176	WP_071392366.1	LCP family protein	-
CHN56_RS13580 (CHN56_02691)	-	2723485..2724132 (-)	648	WP_060657503.1	YigZ family protein	-
CHN56_RS13585 (CHN56_02692)	degS	2724355..2725518 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
CHN56_RS13590 (CHN56_02693)	degU	2725595..2726284 (+)	690	WP_094247453.1	two-component system response regulator DegU	Regulator
CHN56_RS13595 (CHN56_02694)	-	2726382..2727230 (+)	849	WP_003151387.1	DegV family protein	-
CHN56_RS13600 (CHN56_02695)	comFA	2727338..2728723 (+)	1386	WP_094247454.1	DEAD/DEAH box helicase	Machinery gene
CHN56_RS13605 (CHN56_02696)	-	2728781..2729065 (+)	285	WP_017418816.1	competence protein ComFB	-
CHN56_RS13610 (CHN56_02697)	comFC	2729071..2729760 (+)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
CHN56_RS13615 (CHN56_02698)	-	2729834..2730253 (+)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=241322 CHN56_RS13585 WP_003151385.1 2724355..2725518(+) (degS) [Bacillus velezensis strain SCDB 291]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=241322 CHN56_RS13585 WP_003151385.1 2724355..2725518(+) (degS) [Bacillus velezensis strain SCDB 291]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948