Detailed information NTG0241270

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BaGK_RS18540
• Genome accession: NZ_CP022653
• Coordinates: 3741190..3742353 (-)
• Length: 387 a.a.
• NCBI ID: WP_003326714.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain GQJK17
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3736190..3747353

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BaGK_RS18510 (BaGK_18510)	-	3736441..3736860 (-)	420	WP_063638074.1	TIGR03826 family flagellar region protein	-
BaGK_RS18515 (BaGK_18515)	comFC	3736932..3737654 (-)	723	WP_149917147.1	double zinc ribbon domain-containing protein	Machinery gene
BaGK_RS18520 (BaGK_18520)	-	3737618..3737914 (-)	297	WP_003326719.1	late competence development ComFB family protein	-
BaGK_RS18525 (BaGK_18525)	comFA	3737971..3739368 (-)	1398	WP_094232855.1	ATP-dependent helicase ComFA	Machinery gene
BaGK_RS18530 (BaGK_18530)	-	3739475..3740317 (-)	843	WP_003326716.1	DegV family protein	-
BaGK_RS18535 (BaGK_18535)	degU	3740424..3741113 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BaGK_RS18540 (BaGK_18540)	degS	3741190..3742353 (-)	1164	WP_003326714.1	two-component sensor histidine kinase DegS	Regulator
BaGK_RS18545 (BaGK_18545)	-	3742571..3743224 (+)	654	WP_003326713.1	YigZ family protein	-
BaGK_RS18550 (BaGK_18550)	-	3743224..3744447 (+)	1224	WP_088118072.1	LCP family protein	-
BaGK_RS18555 (BaGK_18555)	-	3744538..3745614 (-)	1077	WP_063638078.1	MraY family glycosyltransferase	-
BaGK_RS18560 (BaGK_18560)	tuaH	3745755..3746945 (-)	1191	WP_088118521.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45165.02 Da
• Isoelectric Point: 7.1378

>NTDB_id=241270 BaGK_RS18540 WP_003326714.1 3741190..3742353(-) (degS) [Bacillus atrophaeus strain GQJK17]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIDLGDKLEVHTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRIAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TKDFVILMIKDNGKGFDVKDTKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLTL

Nucleotide

• Length: 1164 bp

>NTDB_id=241270 BaGK_RS18540 WP_003326714.1 3741190..3742353(-) (degS) [Bacillus atrophaeus strain GQJK17]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGACTCTATTCTAATGAAGATGCTAAAGACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAGATCGGGGAACAGTCCCGCCAGCAGTATGAGCAGCTGGTTGAAGAATTGAAACAAATCAAACAGCAGG
TATATGAAGTGATTGACCTTGGTGATAAGCTAGAAGTGCATACCCGCCATGCCAGAAACCGTTTATCAGAAGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCCTATGAAAAAGCACATAAACTTCAAGTCGAACTGACAATGAT
TCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGGGATGATTTAGAACGCAGGCTGTTAGGCCTTCAGGAAATTATTGAAC
GGTCAGAATCGTTAGTCAGCCAAATTACTGTGGTGTTAAACTATCTGAATCAAGATTTGCGGCAAGTCGGGTTGCTTCTT
GCAGACGCTCAGGCGAAACAGGATTTTGGATTGAGGATTATTGAAGCCCAAGAAGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTGATGATGAGATCCGAATTAATCGAACGGATCTTTCGCGACCGGG
GGACTGAAGACGGTTTTCAGGAAATTAAAAACCTGCGGCAAAATGTGCGAAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCTCTAGATGATTTGGGTCTGATCCCCACCCTGAGAAAATATCTTTATACAACCGAGGAGTA
TAACGGAAAGGTCAAAATACATTTTCAGTGCATTGGTGATACGGAAGACAAGCGAATTGCGCCACAGTTTGAAGTCGCGC
TCTTCAGGCTCGCACAGGAAGCAGTGACTAACGCGTTAAAGCATTCAGAATCAGAAGAAATAACAGTCAAAGTTGAGGTC
ACAAAAGATTTTGTTATCTTAATGATAAAGGATAACGGAAAAGGCTTTGATGTGAAGGATACTAAACAGAAAAAGAATAA
GTCATTTGGTTTGCTTGGGATGAAAGAGAGAGTAGACTTGCTTGAGGGGACTATTACAATAGACTCTAAAATAGGTCTTG
GGACATTCATTATGATAAAGGTTCCGTTATCTCTTACTCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	96.364	99.483	0.959