Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   Sp14A_RS03215 Genome accession   NZ_CP022601
Coordinates   598236..599237 (+) Length   333 a.a.
NCBI ID   WP_104967453.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain 14A0014     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 593236..604237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Sp14A_RS03200 (Sp14A_06710) - 594717..595277 (+) 561 WP_115129888.1 TIGR00730 family Rossman fold protein -
  Sp14A_RS03205 (Sp14A_06720) - 595481..596683 (-) 1203 WP_115129493.1 IS110 family transposase -
  Sp14A_RS03210 (Sp14A_06730) - 596955..598040 (-) 1086 WP_115129889.1 Xaa-Pro peptidase family protein -
  Sp14A_RS03215 (Sp14A_06740) ccpA 598236..599237 (+) 1002 WP_104967453.1 catabolite control protein A Regulator
  Sp14A_RS03220 (Sp14A_06750) - 599330..600784 (+) 1455 WP_115129890.1 alpha-amylase -
  Sp14A_RS03225 (Sp14A_06760) - 600857..601855 (+) 999 WP_115129891.1 glycosyltransferase -
  Sp14A_RS03230 (Sp14A_06770) - 601857..603200 (+) 1344 WP_115129892.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36729.70 Da        Isoelectric Point: 4.9488

>NTDB_id=241047 Sp14A_RS03215 WP_104967453.1 598236..599237(+) (ccpA) [Streptococcus pluranimalium strain 14A0014]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRQKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNISNAYFA
LLAKGIDDIAEMYKYNIVLASSDENDDKEVNVVNTLFAKQVDGIIFMGHRLTDKIRAEFSRSRTPVVLAGTIDLEHQLPS
VNIDYEKAVEGVVSDLAKNHQKIAFVSGPLLDDINGKVRLAGYKDALNANGIDYTEGLVFEAKYRYEDGYELAERVINSG
ATAAYVGEDELAVGLLNGLFAAGKRVPEDFEIMTSNDSEIVKYTRPNLSSINQPIYDLGAVAMRMLTKIMNKEELEEKEI
ILNHGVTKRASTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=241047 Sp14A_RS03215 WP_104967453.1 598236..599237(+) (ccpA) [Streptococcus pluranimalium strain 14A0014]
ATGAATACAGATGATACGATTACGATTTACGATGTTGCCAGAGAAGCTGGTGTATCGATGGCGACAGTTAGTCGAGTTGT
CAATGGAAACAAAAATGTTAAAGAAAATACTCGGCAGAAAGTACTAGAGGTTATTGACCGTTTAGACTACCGTCCAAATG
CCGTAGCCCGTGGTCTTGCTAGCAAAAAGACAACAACAGTTGGGGTTGTTATTCCAAATATTTCAAATGCTTACTTTGCC
CTCTTAGCCAAAGGGATTGATGATATCGCTGAAATGTACAAATATAACATTGTACTGGCGTCAAGTGATGAGAACGACGA
TAAGGAAGTCAATGTTGTTAATACGCTTTTTGCCAAGCAGGTTGATGGCATTATCTTTATGGGACACCGTCTAACGGATA
AAATTCGTGCTGAGTTTTCACGTTCAAGGACACCAGTAGTTCTTGCGGGTACCATTGACTTAGAACATCAATTACCAAGT
GTTAACATTGATTATGAAAAGGCTGTTGAAGGAGTGGTATCTGACCTAGCTAAAAATCACCAAAAAATCGCCTTTGTCTC
AGGACCACTTCTTGATGATATCAATGGAAAAGTTCGTCTAGCAGGATATAAGGATGCCCTTAATGCTAATGGTATTGATT
ACACTGAAGGGCTTGTTTTTGAGGCTAAATACCGTTACGAAGATGGTTACGAATTGGCAGAACGTGTGATTAATTCAGGT
GCAACAGCTGCTTATGTTGGAGAAGATGAACTAGCTGTGGGACTCTTGAACGGACTCTTTGCGGCTGGGAAACGTGTGCC
AGAAGACTTTGAAATTATGACAAGTAATGATTCTGAAATTGTCAAATACACACGTCCTAACTTATCTTCAATCAATCAAC
CAATTTACGATTTGGGTGCCGTTGCTATGCGTATGTTAACTAAAATCATGAACAAAGAAGAATTGGAAGAAAAAGAAATC
ATTCTTAATCATGGTGTGACAAAACGTGCATCAACAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775
  ccpA Streptococcus pneumoniae D39

76.276

100

0.763
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.399

0.562

Multiple sequence alignment