Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   CF389_RS19065 Genome accession   NZ_CP022556
Coordinates   3830893..3831825 (+) Length   310 a.a.
NCBI ID   WP_050560672.1    Uniprot ID   A0A6A8LDH0
Organism   Bacillus velezensis strain NJAU-Z9     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3825893..3836825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CF389_RS19040 - 3826369..3826920 (+) 552 WP_003152033.1 cysteine hydrolase family protein -
  CF389_RS19045 - 3826938..3828404 (+) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  CF389_RS19050 - 3828534..3829754 (+) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  CF389_RS19055 - 3829761..3830102 (-) 342 WP_003152040.1 hypothetical protein -
  CF389_RS19060 degQ 3830568..3830708 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  CF389_RS19065 comQ 3830893..3831825 (+) 933 WP_050560672.1 class 1 isoprenoid biosynthesis enzyme Regulator
  CF389_RS19075 comP 3831978..3834281 (+) 2304 WP_003152050.1 histidine kinase Regulator
  CF389_RS19080 comA 3834362..3835006 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  CF389_RS19085 - 3835028..3835411 (+) 384 WP_003152054.1 hotdog fold thioesterase -
  CF389_RS19090 mnhG 3835451..3835825 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  CF389_RS19095 - 3835809..3836093 (-) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  CF389_RS19100 - 3836093..3836569 (-) 477 WP_003152059.1 Na+/H+ antiporter subunit E -

Sequence

Protein


Download         Length: 310 a.a.        Molecular weight: 35636.78 Da        Isoelectric Point: 5.4532

>NTDB_id=240760 CF389_RS19065 WP_050560672.1 3830893..3831825(+) (comQ) [Bacillus velezensis strain NJAU-Z9]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGESQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide


Download         Length: 933 bp        

>NTDB_id=240760 CF389_RS19065 WP_050560672.1 3830893..3831825(+) (comQ) [Bacillus velezensis strain NJAU-Z9]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAGTCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGACGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains

Predicted by InterproScan.

Polyprenyl synthetase (polyprenyl_synt)

(44-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6A8LDH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

60.9

93.226

0.568

Multiple sequence alignment