Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   C7M30_RS02270 Genome accession   NZ_CP028218
Coordinates   427072..429018 (-) Length   648 a.a.
NCBI ID   WP_015252109.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102756     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 422072..434018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS02240 (C7M30_00454) yloU 423734..424096 (-) 363 WP_003232054.1 Asp23/Gls24 family envelope stress response protein -
  C7M30_RS02245 (C7M30_00455) rpmB 424373..424561 (+) 189 WP_003221548.1 50S ribosomal protein L28 -
  C7M30_RS02250 spoVM 424634..424714 (-) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  C7M30_RS02255 (C7M30_00456) thiN 424786..425430 (-) 645 WP_123373566.1 thiamine diphosphokinase -
  C7M30_RS02260 (C7M30_00457) rpe 425503..426156 (-) 654 WP_160243923.1 ribulose-phosphate 3-epimerase -
  C7M30_RS02265 (C7M30_00458) rsgA 426161..427057 (-) 897 WP_123373565.1 ribosome small subunit-dependent GTPase A -
  C7M30_RS02270 (C7M30_00459) stkP 427072..429018 (-) 1947 WP_015252109.1 serine/threonine protein kinase PrkC Regulator
  C7M30_RS02275 (C7M30_00460) prpC 429012..429776 (-) 765 WP_014479762.1 protein-serine/threonine phosphatase PrpC -
  C7M30_RS02280 (C7M30_00461) rlmN 429783..430874 (-) 1092 WP_014476780.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  C7M30_RS02285 (C7M30_00462) rsmB 430878..432221 (-) 1344 WP_160243924.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  C7M30_RS02290 (C7M30_00463) fmt 432208..433161 (-) 954 WP_160243925.1 methionyl-tRNA formyltransferase -
  C7M30_RS02295 (C7M30_00464) def 433166..433648 (-) 483 WP_214285011.1 peptide deformylase -

Sequence


Protein


Download         Length: 648 a.a.        Molecular weight: 71880.56 Da        Isoelectric Point: 4.7871

>NTDB_id=240455 C7M30_RS02270 WP_015252109.1 427072..429018(-) (stkP) [Bacillus subtilis strain SRCM102756]
MLIGKRISGRYQILRVIGGGGMANVYLAEDIILDREVAIKILRFDYANDNEFIRRFRREAQSASSLDHPNIVSIYDLGEE
DDIYYIVMEYVEGMTLKEYITANGPLHPKEALNIMEQIVSAIAHAHQNQIVHRDIKPHNILIDHMGNIKVTDFGIATALS
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGRIPFDGESAVSIALKHLQAETPSAKRWNPSVPQS
VENIILKATAKDPFHRYETAEDMEADIKTAFDADRLNEKRFTIQEDEEMTKAIPIIKDEELAKAAGEKEAEVTTAQENKT
KKNGKRKKWPWVLLTICLVFITAGILAVTVFPSLFMPKDVKIPDVSGMEYEKAAGLLEKEGLQVDSEVLEISDEKIEEGL
MVKTDPKADTTVKEGATVTLYKSTGKAKTEIGDVTGQTVDQAKKALKDQGFKHVTVNEVNDEKNAGTVIDQNPSAGTELV
PSEDQVKLTVSIGPEDITLRDLKTYSKEAASGYLEDNGLKLVEKEAYSDDVPEGQVVKQKPAAGTAVKPGNEVEVTFSLG
PEKKPAKTVKEKVKIPYEPENEGDELQVQIAVDDADHSISDTYEEFKIKEPTERTIELKIEPGQKGYYQVMVNNKVVSYK
TIEYPKDE

Nucleotide


Download         Length: 1947 bp        

>NTDB_id=240455 C7M30_RS02270 WP_015252109.1 427072..429018(-) (stkP) [Bacillus subtilis strain SRCM102756]
GTGCTAATCGGCAAGCGGATCAGCGGGCGTTACCAAATTCTCCGCGTTATAGGCGGCGGGGGAATGGCCAACGTGTATTT
AGCTGAGGATATCATTCTAGACCGTGAAGTCGCAATTAAAATCCTGCGGTTTGACTATGCAAATGACAATGAATTTATCA
GACGTTTCCGCAGAGAAGCCCAATCCGCATCAAGCCTCGATCACCCGAATATTGTCAGCATTTACGATTTGGGCGAGGAA
GATGATATTTATTATATTGTCATGGAATACGTTGAAGGCATGACGCTTAAAGAATACATAACAGCAAATGGGCCGCTTCA
CCCTAAAGAAGCGCTGAACATCATGGAGCAAATAGTCTCAGCCATCGCTCATGCCCATCAAAACCAGATTGTTCACAGAG
ACATCAAGCCGCATAACATTTTGATTGATCATATGGGAAATATCAAAGTAACGGATTTTGGAATTGCGACGGCACTAAGT
TCGACCACAATCACCCATACCAATTCAGTTCTGGGCTCGGTCCATTACTTATCACCTGAACAGGCCCGGGGCGGCTTAGC
CACAAAGAAATCGGATATTTATGCGCTTGGAATCGTTCTATTTGAGCTTTTAACCGGCCGTATTCCATTTGATGGAGAGT
CGGCAGTCAGCATCGCCTTGAAGCATCTTCAAGCGGAAACTCCTTCGGCAAAAAGGTGGAATCCATCGGTCCCCCAAAGC
GTTGAAAACATCATACTCAAGGCAACTGCCAAAGATCCTTTTCATCGCTACGAAACGGCTGAAGACATGGAAGCAGACAT
AAAAACAGCTTTTGATGCCGACAGACTCAATGAAAAGAGATTTACGATTCAAGAAGATGAAGAAATGACAAAAGCGATAC
CTATCATTAAAGATGAAGAACTCGCTAAAGCTGCTGGCGAAAAAGAAGCTGAAGTGACAACCGCACAAGAAAACAAAACA
AAGAAGAACGGCAAAAGAAAAAAGTGGCCGTGGGTTTTGCTCACGATATGCCTCGTTTTTATCACAGCTGGAATTCTTGC
TGTCACTGTTTTTCCGTCGCTTTTCATGCCTAAGGATGTCAAAATACCTGATGTCTCCGGAATGGAATACGAAAAAGCCG
CAGGGCTCTTGGAAAAAGAAGGTTTACAGGTTGATTCCGAGGTGTTGGAAATCTCAGATGAAAAAATTGAAGAGGGCCTG
ATGGTAAAAACGGATCCTAAAGCAGATACCACAGTCAAAGAAGGCGCCACGGTCACCCTTTATAAGAGCACCGGAAAAGC
AAAAACGGAGATCGGTGATGTGACAGGCCAAACGGTCGACCAGGCAAAAAAAGCGTTGAAGGACCAAGGGTTTAAACATG
TAACAGTAAATGAAGTGAATGACGAGAAAAATGCGGGCACTGTCATTGACCAAAATCCTTCAGCAGGGACTGAGCTTGTC
CCGAGTGAAGATCAAGTCAAACTTACAGTCAGTATCGGACCCGAAGACATTACGCTTAGAGACTTGAAAACCTACAGTAA
AGAAGCAGCGTCTGGATATCTGGAAGACAACGGATTGAAGCTTGTAGAAAAAGAAGCATACTCAGATGATGTTCCAGAAG
GACAGGTTGTCAAACAAAAACCAGCAGCAGGTACGGCAGTAAAGCCGGGAAACGAAGTTGAAGTGACATTCTCTCTCGGA
CCAGAGAAAAAACCTGCGAAAACAGTGAAAGAAAAGGTCAAGATCCCCTACGAACCAGAAAATGAAGGGGACGAGCTTCA
AGTGCAAATCGCGGTTGACGATGCGGATCACAGCATCTCTGACACTTACGAAGAATTTAAGATAAAAGAGCCGACTGAAC
GAACGATCGAACTAAAGATTGAACCCGGCCAAAAAGGGTACTATCAAGTAATGGTAAACAATAAAGTTGTCAGCTACAAA
ACCATTGAGTATCCGAAAGATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

40.517

89.506

0.363

  stkP Streptococcus pneumoniae D39

40.345

89.506

0.361

  stkP Streptococcus pneumoniae R6

40.345

89.506

0.361


Multiple sequence alignment