Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CGZ77_RS11740 Genome accession   NZ_CP022527
Coordinates   2355231..2355698 (-) Length   155 a.a.
NCBI ID   WP_009426483.1    Uniprot ID   L1NQ52
Organism   Neisseria sp. KEM232     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2350231..2360698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ77_RS12805 - 2351145..2351387 (+) 243 Protein_2340 IS1595 family transposase -
  CGZ77_RS12810 comE 2351391..2351558 (+) 168 WP_369830588.1 ComEA family DNA-binding protein Machinery gene
  CGZ77_RS11720 (CGZ77_11725) - 2351676..2352533 (-) 858 WP_094031197.1 EamA family transporter -
  CGZ77_RS11725 (CGZ77_11730) - 2352653..2353315 (-) 663 WP_009426480.1 NAD(P)H-dependent oxidoreductase -
  CGZ77_RS11730 (CGZ77_11735) - 2353387..2353938 (+) 552 WP_009426481.1 MarR family winged helix-turn-helix transcriptional regulator -
  CGZ77_RS11735 (CGZ77_11740) - 2354221..2355042 (-) 822 WP_009426482.1 symmetrical bis(5'-nucleosyl)-tetraphosphatase -
  CGZ77_RS11740 (CGZ77_11745) recX 2355231..2355698 (-) 468 WP_009426483.1 recombination regulator RecX Regulator
  CGZ77_RS11745 (CGZ77_11750) - 2355883..2356599 (-) 717 WP_009426484.1 phosphoglycolate phosphatase -
  CGZ77_RS11750 (CGZ77_11755) - 2356858..2357562 (-) 705 WP_009426486.1 5'-methylthioadenosine/adenosylhomocysteine nucleosidase -
  CGZ77_RS11755 (CGZ77_11760) - 2357559..2358011 (-) 453 WP_009426487.1 S-ribosylhomocysteine lyase -
  CGZ77_RS11760 (CGZ77_11765) - 2358145..2358948 (-) 804 WP_009426489.1 RNA methyltransferase -
  CGZ77_RS11765 (CGZ77_11770) - 2359213..2360010 (+) 798 WP_009426491.1 inositol monophosphatase family protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 17872.10 Da        Isoelectric Point: 8.3918

>NTDB_id=240329 CGZ77_RS11740 WP_009426483.1 2355231..2355698(-) (recX) [Neisseria sp. KEM232]
MKPQKSLRARALDILARSETGRAALKRKLAPYAQSEEELEAVLNEMAERGWQSDERYAEAYIHSKSQKHGSLRLRRDLEQ
QGIDRDTVRALLPDAEQELAAAVAAVQKKFKAPPQDYAEKQKQMRFLAYRGFDGDTVRLALRQAWADWRDEWDGE

Nucleotide


Download         Length: 468 bp        

>NTDB_id=240329 CGZ77_RS11740 WP_009426483.1 2355231..2355698(-) (recX) [Neisseria sp. KEM232]
ATGAAACCGCAAAAATCCCTGCGCGCCCGCGCCCTCGACATCCTCGCCCGCAGCGAAACCGGCCGCGCCGCCCTCAAACG
CAAACTCGCCCCGTATGCCCAAAGCGAAGAAGAGTTGGAGGCCGTCTTAAACGAAATGGCCGAACGCGGCTGGCAGTCGG
ACGAGCGTTACGCCGAAGCCTACATCCACAGCAAAAGCCAAAAACACGGCAGCCTGCGCCTGCGCCGCGACCTCGAACAG
CAGGGCATAGACCGCGACACCGTCCGCGCCCTCCTGCCCGACGCGGAACAGGAACTCGCCGCCGCCGTGGCCGCCGTGCA
GAAAAAATTCAAAGCCCCGCCGCAGGACTACGCGGAAAAACAAAAGCAGATGCGCTTTCTCGCCTACCGCGGCTTCGACG
GCGACACCGTCCGCCTCGCCCTGCGCCAAGCCTGGGCGGATTGGCGCGACGAATGGGACGGCGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(34-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB L1NQ52

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

68.212

97.419

0.665

Multiple sequence alignment