Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   CG450_RS04715 Genome accession   NZ_CP022477
Coordinates   955962..956600 (+) Length   212 a.a.
NCBI ID   WP_003184849.1    Uniprot ID   D9YRJ9
Organism   Bacillus licheniformis strain BL-010     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 950962..961600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG450_RS04685 - 951304..951651 (-) 348 WP_009329512.1 hypothetical protein -
  CG450_RS04695 degQ 952137..952277 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  CG450_RS04700 - 952466..953335 (+) 870 WP_011198252.1 polyprenyl synthetase family protein -
  CG450_RS04705 comX 953350..953514 (+) 165 WP_011198251.1 competence pheromone ComX -
  CG450_RS04710 comP 953554..955875 (+) 2322 WP_026080865.1 ATP-binding protein Regulator
  CG450_RS04715 comA 955962..956600 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  CG450_RS04720 - 956617..957006 (+) 390 WP_003184847.1 hotdog fold thioesterase -
  CG450_RS04725 mnhG 957046..957420 (-) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  CG450_RS04730 - 957404..957688 (-) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  CG450_RS04735 - 957688..958164 (-) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  CG450_RS04740 - 958170..959648 (-) 1479 WP_003184838.1 Na+/H+ antiporter subunit D -
  CG450_RS04745 - 959641..959982 (-) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  CG450_RS04750 - 959982..960413 (-) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 212 a.a.        Molecular weight: 24146.54 Da        Isoelectric Point: 4.7105

>NTDB_id=239872 CG450_RS04715 WP_003184849.1 955962..956600(+) (comA) [Bacillus licheniformis strain BL-010]
MRRLLVIDDHPAVMEGTKAILETNQDFVVDCLSPEASEQFLKKHDFSAYDLILMDLNLGEINGMDLSKKILETCSSCKII
VYTGYEVEDYFEEAIRSGMHGAISKTESKEKIIEYIYQVLDNKIVVDYDYFKQLITQQKSKSNSQQTQHDLLTERECLIL
KEVEKGYTNQEIADALHLSKRSIEYSLTSVFSKLNVGSRTEAVLIAKSEGVL

Nucleotide


Download         Length: 639 bp        

>NTDB_id=239872 CG450_RS04715 WP_003184849.1 955962..956600(+) (comA) [Bacillus licheniformis strain BL-010]
ATGAGAAGATTACTTGTGATCGATGATCATCCGGCTGTCATGGAGGGGACGAAGGCAATTCTTGAAACGAACCAGGACTT
TGTTGTCGATTGCCTCAGCCCTGAAGCCAGCGAACAATTTCTCAAGAAACATGATTTTTCTGCGTATGACCTGATCTTAA
TGGATTTAAATTTGGGTGAAATCAACGGCATGGACCTATCTAAGAAAATCCTTGAGACATGTTCATCATGCAAAATTATC
GTTTACACAGGCTATGAAGTCGAAGATTATTTTGAAGAGGCGATTCGTTCCGGCATGCACGGCGCCATCAGCAAAACGGA
ATCGAAGGAAAAGATTATAGAGTACATATATCAGGTTCTGGATAATAAAATTGTCGTCGATTATGATTATTTCAAGCAGT
TGATTACACAGCAAAAATCGAAGTCAAACAGCCAGCAGACCCAGCACGACCTCTTGACTGAAAGGGAATGCCTGATTTTA
AAAGAAGTCGAAAAAGGCTACACAAATCAGGAAATTGCTGATGCGCTTCATTTAAGCAAGCGGTCGATCGAATACAGCTT
GACTTCCGTATTCAGCAAGCTGAATGTAGGATCAAGGACAGAGGCTGTTTTAATCGCGAAATCTGAAGGTGTACTCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-116)

Bacterial regulatory proteins, luxR family (GerE)

(151-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB D9YRJ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

77.103

100

0.778

Multiple sequence alignment