Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   CG450_RS04695 Genome accession   NZ_CP022477
Coordinates   952137..952277 (+) Length   46 a.a.
NCBI ID   WP_003184860.1    Uniprot ID   P69890
Organism   Bacillus licheniformis strain BL-010     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 947137..957277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG450_RS04665 - 947238..947639 (+) 402 WP_003184870.1 YueI family protein -
  CG450_RS04670 - 947824..948375 (+) 552 WP_003184868.1 cysteine hydrolase family protein -
  CG450_RS04675 - 948393..949862 (+) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  CG450_RS04680 - 950041..951261 (+) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  CG450_RS04685 - 951304..951651 (-) 348 WP_009329512.1 hypothetical protein -
  CG450_RS04695 degQ 952137..952277 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  CG450_RS04700 - 952466..953335 (+) 870 WP_011198252.1 polyprenyl synthetase family protein -
  CG450_RS04705 comX 953350..953514 (+) 165 WP_011198251.1 competence pheromone ComX -
  CG450_RS04710 comP 953554..955875 (+) 2322 WP_026080865.1 ATP-binding protein Regulator
  CG450_RS04715 comA 955962..956600 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  CG450_RS04720 - 956617..957006 (+) 390 WP_003184847.1 hotdog fold thioesterase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5747.56 Da        Isoelectric Point: 8.4596

>NTDB_id=239870 CG450_RS04695 WP_003184860.1 952137..952277(+) (degQ) [Bacillus licheniformis strain BL-010]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKTS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=239870 CG450_RS04695 WP_003184860.1 952137..952277(+) (degQ) [Bacillus licheniformis strain BL-010]
GTGGAAAAGCAACAAATTGAAGAATTAAAACAACTGCTTTGGCGGCTAGAGAATGAAATCAGAGAAACAAAGGACTCCTT
GCGCAAGATTAACAAAAGCATTGATCAATACGATAAGTACACATATTTAAAAACCTCGTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P69890

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652

Multiple sequence alignment