Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | C7M23_RS11465 | Genome accession | NZ_CP028209 |
| Coordinates | 2208185..2209312 (-) | Length | 375 a.a. |
| NCBI ID | WP_131227647.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM102745 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2203185..2214312
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M23_RS21180 (C7M23_02238) | - | 2203382..2204374 (+) | 993 | WP_250622469.1 | HNH endonuclease signature motif containing protein | - |
| C7M23_RS11440 (C7M23_02239) | - | 2204394..2204939 (+) | 546 | WP_069322772.1 | SMI1/KNR4 family protein | - |
| C7M23_RS11445 (C7M23_02240) | - | 2205133..2205573 (-) | 441 | WP_131227651.1 | SMI1/KNR4 family protein | - |
| C7M23_RS11450 (C7M23_02241) | - | 2205589..2207424 (-) | 1836 | WP_131227649.1 | T7SS effector LXG polymorphic toxin | - |
| C7M23_RS11455 | - | 2207792..2207951 (-) | 160 | Protein_2216 | hypothetical protein | - |
| C7M23_RS11460 (C7M23_02243) | phrE | 2208061..2208195 (-) | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| C7M23_RS11465 (C7M23_02244) | rapC | 2208185..2209312 (-) | 1128 | WP_131227647.1 | response regulator aspartate phosphatase RapE | Regulator |
| C7M23_RS11470 | - | 2209809..2209939 (-) | 131 | Protein_2219 | DUF255 domain-containing protein | - |
| C7M23_RS11475 (C7M23_02245) | - | 2210221..2211216 (-) | 996 | WP_029318099.1 | acryloyl-CoA reductase | - |
| C7M23_RS11480 (C7M23_02246) | - | 2211374..2211967 (+) | 594 | WP_029318098.1 | TetR/AcrR family transcriptional regulator | - |
| C7M23_RS11485 | - | 2212400..2212564 (+) | 165 | WP_080265384.1 | hypothetical protein | - |
| C7M23_RS11490 | - | 2212522..2212718 (+) | 197 | Protein_2223 | recombinase family protein | - |
| C7M23_RS11495 | - | 2212684..2212800 (-) | 117 | WP_122894874.1 | hypothetical protein | - |
| C7M23_RS11500 (C7M23_02247) | sigK | 2212800..2213528 (-) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| C7M23_RS11505 (C7M23_02248) | nucA/comI | 2213724..2214134 (+) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 44640.47 Da Isoelectric Point: 7.5547
>NTDB_id=239754 C7M23_RS11465 WP_131227647.1 2208185..2209312(-) (rapC) [Bacillus subtilis strain SRCM102745]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYMRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYMRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
Nucleotide
Download Length: 1128 bp
>NTDB_id=239754 C7M23_RS11465 WP_131227647.1 2208185..2209312(-) (rapC) [Bacillus subtilis strain SRCM102745]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTTACTGA
TGCTGAAATGTTAAAAGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAT
TGATGGCCTTTCGCCATAAGATCATGTTGGAATACACGCTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATCGAAGGCCATAAGAAAAAACTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAGATTG
AAAAAGCAGAGTTTTATTTTAAGTTATCGGAAGTCTATTATCATATGAAAATGACACATATCTCAATGCACTACGCTGAA
CTTTCATACAACATCTATAAAAAACATGAACTTTATTCTGTTCGGCGTATACAGTGCCATTTTGTCATAGCCGGTAACTA
CGATGACCTTGAAAACCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACCGCATTTTTCAATCTCGGTAACTGCTATCACAAAATGGACAACCTAAATAAGGCTGCACGT
TACATCGAACAAGCTTTGGTTCAATACAGAAAAATAAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATGAGAAATGGCGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTTACTGA
TGCTGAAATGTTAAAAGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAT
TGATGGCCTTTCGCCATAAGATCATGTTGGAATACACGCTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATCGAAGGCCATAAGAAAAAACTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAGATTG
AAAAAGCAGAGTTTTATTTTAAGTTATCGGAAGTCTATTATCATATGAAAATGACACATATCTCAATGCACTACGCTGAA
CTTTCATACAACATCTATAAAAAACATGAACTTTATTCTGTTCGGCGTATACAGTGCCATTTTGTCATAGCCGGTAACTA
CGATGACCTTGAAAACCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACCGCATTTTTCAATCTCGGTAACTGCTATCACAAAATGGACAACCTAAATAAGGCTGCACGT
TACATCGAACAAGCTTTGGTTCAATACAGAAAAATAAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATGAGAAATGGCGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.897 |
100 |
0.413 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
38.196 |
100 |
0.384 |