Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | BGM07_RS10760 | Genome accession | NZ_CP022473 |
| Coordinates | 407862..408506 (-) | Length | 214 a.a. |
| NCBI ID | WP_005480993.1 | Uniprot ID | Q87LA2 |
| Organism | Vibrio parahaemolyticus strain MAVP-Q | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 402862..413506
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGM07_RS10750 (BGM07_010780) | uvrA | 403771..406593 (-) | 2823 | WP_005490537.1 | excinuclease ABC subunit UvrA | - |
| BGM07_RS10755 (BGM07_010785) | galU | 406731..407603 (-) | 873 | WP_005466627.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| BGM07_RS10760 (BGM07_010790) | qstR | 407862..408506 (-) | 645 | WP_005480993.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| BGM07_RS10765 (BGM07_010795) | ssb | 408785..409315 (+) | 531 | WP_005466625.1 | single-stranded DNA-binding protein | Machinery gene |
| BGM07_RS10770 (BGM07_010800) | csrD | 409556..411565 (+) | 2010 | WP_011106082.1 | RNase E specificity factor CsrD | - |
| BGM07_RS10775 (BGM07_010805) | - | 411577..413022 (+) | 1446 | WP_021450081.1 | MSHA biogenesis protein MshI | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24386.20 Da Isoelectric Point: 8.7760
>NTDB_id=239754 BGM07_RS10760 WP_005480993.1 407862..408506(-) (qstR) [Vibrio parahaemolyticus strain MAVP-Q]
MRKSAYARKLFLISMEDDAAQKVASLEKYIDMSIPVISTDALMEAKPEHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLAFGQLKGLFYSEDSLEQVGEGLKGIVNGQNWLPRNVTSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
MRKSAYARKLFLISMEDDAAQKVASLEKYIDMSIPVISTDALMEAKPEHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLAFGQLKGLFYSEDSLEQVGEGLKGIVNGQNWLPRNVTSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
Nucleotide
Download Length: 645 bp
>NTDB_id=239754 BGM07_RS10760 WP_005480993.1 407862..408506(-) (qstR) [Vibrio parahaemolyticus strain MAVP-Q]
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATTAGTATGGAAGACGATGCTGCGCAAAAAGTCGCATCGTTAGA
AAAGTACATCGATATGAGCATTCCTGTAATCTCAACCGATGCCCTAATGGAAGCGAAACCCGAACATCGAAATAAAATTC
TACTCATTGACTTCAGTGAACATAAATCACTCGTTCAATCGATTAAAAACCTGCCATTGGTTTGGAAGAACTTTGAGACG
GTCGTGTTCAACGTTCCAAAGCGCCTCACTACGGATGAACTGCTCGCCTTCGGTCAATTAAAAGGCTTGTTTTACAGCGA
AGATTCTTTAGAACAAGTCGGCGAAGGACTGAAAGGTATTGTCAACGGGCAAAACTGGCTACCACGCAACGTAACCAGCC
AACTGCTGCACTACTATCGAAATGTGATAAATACTCACACCGCGCCAGCAACCGTCGATCTCACCATTCGCGAACTGCAA
GTGCTGCGTTGTCTGCAAGCTGGAGCATCGAATAGCCAGATGGCAGAAGAACTGTTTGTTAGCGAATTTACGATCAAGTC
GCACCTGTATCAGATCTTTAAAAAGCTCTCAGTGAAAAACCGAGTTCAAGCCATTGCTTGGGCCGATCAAAACTTGATGT
CTTAA
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATTAGTATGGAAGACGATGCTGCGCAAAAAGTCGCATCGTTAGA
AAAGTACATCGATATGAGCATTCCTGTAATCTCAACCGATGCCCTAATGGAAGCGAAACCCGAACATCGAAATAAAATTC
TACTCATTGACTTCAGTGAACATAAATCACTCGTTCAATCGATTAAAAACCTGCCATTGGTTTGGAAGAACTTTGAGACG
GTCGTGTTCAACGTTCCAAAGCGCCTCACTACGGATGAACTGCTCGCCTTCGGTCAATTAAAAGGCTTGTTTTACAGCGA
AGATTCTTTAGAACAAGTCGGCGAAGGACTGAAAGGTATTGTCAACGGGCAAAACTGGCTACCACGCAACGTAACCAGCC
AACTGCTGCACTACTATCGAAATGTGATAAATACTCACACCGCGCCAGCAACCGTCGATCTCACCATTCGCGAACTGCAA
GTGCTGCGTTGTCTGCAAGCTGGAGCATCGAATAGCCAGATGGCAGAAGAACTGTTTGTTAGCGAATTTACGATCAAGTC
GCACCTGTATCAGATCTTTAAAAAGCTCTCAGTGAAAAACCGAGTTCAAGCCATTGCTTGGGCCGATCAAAACTTGATGT
CTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
100 |
100 |
1 |
| qstR | Vibrio campbellii strain DS40M4 |
89.252 |
100 |
0.893 |
| qstR | Vibrio cholerae strain A1552 |
52.093 |
100 |
0.523 |