Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   C7M23_RS08430 Genome accession   NZ_CP028209
Coordinates   1637545..1638405 (+) Length   286 a.a.
NCBI ID   WP_041850585.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102745     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1632545..1643405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS08400 (C7M23_01651) pncA 1633010..1633561 (+) 552 WP_015714627.1 isochorismatase family cysteine hydrolase -
  C7M23_RS08405 (C7M23_01652) pncB 1633577..1635049 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  C7M23_RS08410 (C7M23_01653) pdeH 1635186..1636415 (+) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  C7M23_RS08415 (C7M23_01654) - 1636391..1636759 (-) 369 WP_014477834.1 hypothetical protein -
  C7M23_RS08420 - 1636873..1636998 (-) 126 WP_003228793.1 hypothetical protein -
  C7M23_RS08425 (C7M23_01655) degQ 1637220..1637360 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C7M23_RS08430 (C7M23_01656) comQ 1637545..1638405 (+) 861 WP_041850585.1 polyprenyl synthetase family protein Regulator
  C7M23_RS08435 (C7M23_01657) comX 1638418..1638582 (+) 165 WP_015384519.1 competence pheromone ComX -
  C7M23_RS08440 (C7M23_01658) comP 1638594..1640894 (+) 2301 WP_088300729.1 histidine kinase Regulator
  C7M23_RS08445 (C7M23_01659) comA 1640975..1641619 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C7M23_RS08450 (C7M23_01660) yuxO 1641638..1642018 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  C7M23_RS08455 (C7M23_01661) mnhG 1642061..1642435 (-) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  C7M23_RS08460 (C7M23_01662) mrpF 1642419..1642703 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C7M23_RS08465 (C7M23_01663) mrpE 1642703..1643179 (-) 477 WP_029318490.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32545.49 Da        Isoelectric Point: 4.8309

>NTDB_id=239733 C7M23_RS08430 WP_041850585.1 1637545..1638405(+) (comQ) [Bacillus subtilis strain SRCM102745]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIIAQIENDYRGLYYLNNDFIQKKNTLAYLYLNKRFNAASAEILSWYENTELFLSLNSKQIK
EKLTEAGVVQYLLVMKHLSLQKLKKEIARLELQENKIKKLITGIIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=239733 C7M23_RS08430 WP_041850585.1 1637545..1638405(+) (comQ) [Bacillus subtilis strain SRCM102745]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATTGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGCTGGCAACAGGCAAATACCATCCCATTGTAGCTTCTTATTCTTATGAACTTGGGATTATTGCACAAATCGAAAATGA
TTACCGAGGTTTATATTATCTAAATAACGATTTTATTCAGAAGAAAAACACATTGGCATACTTATACTTAAATAAACGTT
TTAATGCAGCTTCTGCAGAAATCTTGAGTTGGTATGAAAATACTGAGTTGTTCTTATCATTGAATTCCAAACAAATAAAA
GAAAAATTAACTGAGGCAGGCGTAGTGCAATATTTACTTGTAATGAAACACTTGTCATTACAAAAACTAAAGAAAGAAAT
TGCTAGATTAGAATTGCAAGAGAATAAAATAAAAAAATTAATAACAGGAATCATAAAATAA

Domains


Predicted by InterProScan.

(39-197)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.423

99.301

0.451


Multiple sequence alignment