Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   CGZ53_RS02885 Genome accession   NZ_CP022435
Coordinates   523707..524708 (+) Length   333 a.a.
NCBI ID   WP_100911951.1    Uniprot ID   -
Organism   Streptococcus uberis strain NZ01     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 518707..529708
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ53_RS02860 (CGZ53_02850) - 519022..519336 (+) 315 WP_012658057.1 PTS cellobiose transporter subunit IIA -
  CGZ53_RS02865 (CGZ53_02855) - 519362..519880 (+) 519 WP_012658058.1 hypothetical protein -
  CGZ53_RS02870 (CGZ53_02860) celB 519907..521235 (+) 1329 WP_012658059.1 PTS cellobiose transporter subunit IIC -
  CGZ53_RS02875 (CGZ53_02865) - 521301..522389 (+) 1089 WP_100911950.1 DUF871 domain-containing protein -
  CGZ53_RS02880 (CGZ53_02870) - 522450..523535 (-) 1086 WP_046389179.1 aminopeptidase P family protein -
  CGZ53_RS02885 (CGZ53_02875) ccpA 523707..524708 (+) 1002 WP_100911951.1 catabolite control protein A Regulator
  CGZ53_RS02890 (CGZ53_02880) - 524749..526218 (+) 1470 WP_037592363.1 alpha-amylase -
  CGZ53_RS02895 (CGZ53_02885) - 526292..527290 (+) 999 WP_046389180.1 glycosyltransferase family 4 protein -
  CGZ53_RS02900 (CGZ53_02890) - 527292..528626 (+) 1335 WP_012658065.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36690.82 Da        Isoelectric Point: 5.5101

>NTDB_id=239374 CGZ53_RS02885 WP_100911951.1 523707..524708(+) (ccpA) [Streptococcus uberis strain NZ01]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYQAAVAEVIDILAENHKKIAFVSGPLIDDINGKVRLSGYKEGLKKNKLDYKEGLVFEANYSYKEGYELVQRVINSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPVVEYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKRRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=239374 CGZ53_RS02885 WP_100911951.1 523707..524708(+) (ccpA) [Streptococcus uberis strain NZ01]
ATGAACACAGATGATACCATTACGATTTATGATGTTGCTCGTGAAGCTGGTGTTTCAATGGCAACTGTCAGCCGTGTTGT
AAATGGAAATAAAAACGTTAAGGAAAATACACGCAAAAAAGTTTTAGAAGTTATCGATCGTTTAGATTATCGTCCTAACG
CCGTCGCTCGTGGACTTGCAAGTAAGAAAACAACAACTGTTGGTGTTGTTATTCCAAATATTGCCAATGCCTATTTTTCA
ATTTTAGCCAAAGGTATTGATGATATCGCAGCCATGTACAAATATAACATTGTCTTGGCATCTAGTGACGAGGACGATGA
TAAAGAAGTCAATGTTGTCAATACCCTCTTTGCCAAACAAGTTGATGGGATTATTTTCATGGGTCACCATTTAACAGAAA
AAATTCGTGCAGAATTTTCACGTTCTAGAACCCCTATCGTTTTAGCAGGTACCGTTGACCTTGAACACCAACTTCCAAGC
GTTAATATTGACTATCAAGCAGCAGTCGCTGAGGTTATTGATATTTTAGCAGAGAACCATAAGAAAATCGCATTTGTATC
AGGTCCACTTATTGATGATATCAATGGTAAAGTACGTCTTTCTGGTTATAAAGAAGGCCTTAAAAAGAATAAATTAGATT
ATAAAGAAGGCTTAGTCTTTGAAGCCAATTATTCTTACAAAGAAGGCTATGAATTGGTACAGCGTGTGATTAATTCTGGA
GCAACTGCAGCTTATGTCGGTGAAGATGAATTAGCAGCTGGTTTATTAAATGGTCTCTTTGCGGCAGGAAAAAGTGTACC
TGAAGATTTTGAAATCATTACAAGTAATGATTCACCTGTTGTTGAATACACTCGTCCTAACTTGAGTTCAATTAGTCAAC
CAGTTTATGATTTAGGTGCCGTAAGTATGCGTATGTTAACAAAAATCATGAACAAAGAAGAATTAGAAGAAAAAGAGATT
CTATTAAACCATGGCATCAAACGTCGTGGAACAACAAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.979

100

0.79
  ccpA Streptococcus pneumoniae D39

76.577

100

0.766
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547

Multiple sequence alignment