Detailed information NTG0239212

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CGC32_RS05625
• Genome accession: NZ_CP022409
• Coordinates: 1141842..1142642 (-)
• Length: 266 a.a.
• NCBI ID: WP_089482814.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain G272
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1136842..1147642

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CGC32_RS05575 (CGC32_05580)	-	1137697..1138477 (-)	781	Protein_1059	hypothetical protein	-
CGC32_RS05580 (CGC32_05585)	-	1138477..1138858 (-)	382	Protein_1060	DUF1294 domain-containing protein	-
CGC32_RS05585 (CGC32_05590)	-	1138986..1139132 (-)	147	WP_232462321.1	hypothetical protein	-
CGC32_RS05595 (CGC32_05600)	-	1139190..1139351 (-)	162	WP_014536434.1	lysozyme	-
CGC32_RS05600 (CGC32_05605)	-	1139371..1139745 (-)	375	WP_232462296.1	lysozyme	-
CGC32_RS05605 (CGC32_05610)	-	1139884..1140444 (-)	561	WP_089482811.1	hypothetical protein	-
CGC32_RS05610 (CGC32_05615)	-	1140428..1140766 (-)	339	WP_089482812.1	hypothetical protein	-
CGC32_RS05615 (CGC32_05620)	-	1140950..1141210 (-)	261	WP_089483116.1	tetratricopeptide repeat protein	-
CGC32_RS05620 (CGC32_05625)	dprB	1141441..1141845 (-)	405	WP_089482813.1	Holliday junction resolvase RuvX	Machinery gene
CGC32_RS05625 (CGC32_05630)	dprA	1141842..1142642 (-)	801	WP_089482814.1	DNA-processing protein DprA	Machinery gene
CGC32_RS05630 (CGC32_05635)	minE	1142654..1142887 (-)	234	WP_000051424.1	cell division topological specificity factor MinE	-
CGC32_RS05635 (CGC32_05640)	minD	1142884..1143690 (-)	807	WP_089482815.1	septum site-determining protein MinD	-
CGC32_RS05640 (CGC32_05645)	ilvC	1143715..1144707 (-)	993	WP_089483117.1	ketol-acid reductoisomerase	-
CGC32_RS05650 (CGC32_05655)	-	1144956..1145738 (+)	783	WP_089482816.1	NAD+ synthase	-
CGC32_RS05655 (CGC32_05660)	-	1145735..1146673 (+)	939	WP_089482817.1	tetraacyldisaccharide 4'-kinase	-
CGC32_RS05660 (CGC32_05665)	pseH	1146606..1147148 (-)	543	WP_089482818.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29717.63 Da
• Isoelectric Point: 8.2316

>NTDB_id=239212 CGC32_RS05625 WP_089482814.1 1141842..1142642(-) (dprA) [Helicobacter pylori strain G272]
MKSNFPYSALENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHIITLARELAQNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=239212 CGC32_RS05625 WP_089482814.1 1141842..1142642(-) (dprA) [Helicobacter pylori strain G272]
ATGAAAAGCAACTTCCCATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACATCATCACTCTAGCCAGAGAGCTTGCTCAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAATGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCTTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTACCCCAGCGCTTGAATGAGAGCGATGG
CACTAATGAACTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTGGAATATGAGCTGTTGGGTAAGATTAAACGTATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.489	100	0.955
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.537	81.203	0.402