Detailed information
Bioinformatically predicted
Overview
| Name | ccpA | Type | Regulator |
| Locus tag | QMA0248_RS06660 | Genome accession | NZ_CP022392 |
| Coordinates | 1371532..1372533 (-) | Length | 333 a.a. |
| NCBI ID | WP_003101380.1 | Uniprot ID | - |
| Organism | Streptococcus iniae strain QMA0248 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1356657..1429144 | 1371532..1372533 | within | 0 |
Gene organization within MGE regions
Location: 1356657..1429144
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMA0248_RS06600 (QMA0248_1336) | dhaS | 1357726..1358271 (+) | 546 | WP_003101362.1 | dihydroxyacetone kinase transcriptional activator DhaS | - |
| QMA0248_RS06605 (QMA0248_1337) | dhaQ | 1358274..1359263 (+) | 990 | WP_003101364.1 | DhaKLM operon coactivator DhaQ | - |
| QMA0248_RS06610 (QMA0248_1340) | - | 1359856..1360967 (+) | 1112 | WP_089180045.1 | IS3-like element IS981 family transposase | - |
| QMA0248_RS06615 (QMA0248_1341) | - | 1361131..1362306 (+) | 1176 | WP_003099060.1 | IS256 family transposase | - |
| QMA0248_RS06620 (QMA0248_1342) | - | 1362331..1362819 (-) | 489 | WP_089180124.1 | ATP-binding cassette domain-containing protein | - |
| QMA0248_RS06625 (QMA0248_1343) | - | 1363209..1363994 (-) | 786 | WP_003101367.1 | ABC transporter permease | - |
| QMA0248_RS06630 (QMA0248_1344) | - | 1363996..1364814 (-) | 819 | WP_003101368.1 | ABC transporter permease | - |
| QMA0248_RS06635 (QMA0248_1345) | - | 1364816..1365808 (-) | 993 | WP_003101369.1 | ATP-binding cassette domain-containing protein | - |
| QMA0248_RS06640 (QMA0248_1346) | tnpA | 1366084..1366548 (-) | 465 | WP_003101370.1 | IS200/IS605 family transposase | - |
| QMA0248_RS06645 (QMA0248_1347) | thrS | 1366741..1368681 (-) | 1941 | WP_003101371.1 | threonine--tRNA ligase | - |
| QMA0248_RS06650 (QMA0248_1348) | - | 1369066..1370403 (-) | 1338 | WP_003101376.1 | glycosyltransferase family 4 protein | - |
| QMA0248_RS06655 (QMA0248_1349) | - | 1370405..1371403 (-) | 999 | WP_003101378.1 | glycosyltransferase family 4 protein | - |
| QMA0248_RS06660 (QMA0248_1350) | ccpA | 1371532..1372533 (-) | 1002 | WP_003101380.1 | catabolite control protein A | Regulator |
| QMA0248_RS06665 (QMA0248_1351) | - | 1372705..1373790 (+) | 1086 | WP_003101382.1 | M24 family metallopeptidase | - |
| QMA0248_RS06670 (QMA0248_1352) | - | 1373953..1374294 (-) | 342 | WP_003101385.1 | hypothetical protein | - |
| QMA0248_RS06675 (QMA0248_1353) | - | 1374484..1375146 (+) | 663 | WP_003101387.1 | NAD(P)H-dependent oxidoreductase | - |
| QMA0248_RS06680 (QMA0248_1354) | - | 1375157..1375537 (+) | 381 | WP_003101389.1 | VOC family protein | - |
| QMA0248_RS06685 (QMA0248_1355) | - | 1375664..1376590 (+) | 927 | WP_003101392.1 | glycosyltransferase family 2 protein | - |
| QMA0248_RS06690 (QMA0248_1356) | - | 1376734..1377417 (+) | 684 | WP_016356084.1 | DUF969 domain-containing protein | - |
| QMA0248_RS06695 (QMA0248_1357) | - | 1377417..1378343 (+) | 927 | WP_003101395.1 | DUF979 domain-containing protein | - |
| QMA0248_RS06700 (QMA0248_1358) | - | 1378425..1379600 (-) | 1176 | WP_003099060.1 | IS256 family transposase | - |
| QMA0248_RS06705 (QMA0248_1359) | pcp | 1379727..1380374 (+) | 648 | WP_003101396.1 | pyroglutamyl-peptidase I | - |
| QMA0248_RS06710 (QMA0248_1360) | - | 1380525..1381241 (-) | 717 | WP_003101397.1 | glutaminyl-peptide cyclotransferase | - |
| QMA0248_RS06715 (QMA0248_1361) | smpB | 1381251..1381718 (-) | 468 | WP_003101398.1 | SsrA-binding protein SmpB | - |
| QMA0248_RS06720 (QMA0248_1362) | rnr | 1381718..1384033 (-) | 2316 | WP_003101399.1 | ribonuclease R | - |
| QMA0248_RS06725 (QMA0248_1363) | secG | 1384120..1384356 (-) | 237 | WP_003101400.1 | preprotein translocase subunit SecG | - |
| QMA0248_RS06730 (QMA0248_2095) | rpmG | 1384402..1384548 (-) | 147 | WP_016356085.1 | 50S ribosomal protein L33 | - |
| QMA0248_RS06735 (QMA0248_1364) | - | 1384790..1386271 (-) | 1482 | WP_003101401.1 | helicase HerA-like domain-containing protein | - |
| QMA0248_RS06740 (QMA0248_1365) | - | 1386371..1387009 (-) | 639 | WP_003101409.1 | YczE/YyaS/YitT family protein | - |
| QMA0248_RS06745 (QMA0248_1366) | coaE | 1387017..1387619 (-) | 603 | WP_016356086.1 | dephospho-CoA kinase | - |
| QMA0248_RS06750 (QMA0248_1367) | mutM | 1387586..1388425 (-) | 840 | WP_003101415.1 | DNA-formamidopyrimidine glycosylase | - |
| QMA0248_RS06755 (QMA0248_1368) | - | 1388618..1389457 (-) | 840 | WP_003101416.1 | helix-turn-helix domain-containing protein | - |
| QMA0248_RS10530 | - | 1389547..1389615 (+) | 69 | WP_142924915.1 | SHP2/SHP3 family peptide pheromone | - |
| QMA0248_RS06760 (QMA0248_1369) | - | 1389734..1391356 (+) | 1623 | WP_003101417.1 | transglutaminase domain-containing protein | - |
| QMA0248_RS10365 | - | 1391496..1391645 (+) | 150 | WP_016356087.1 | hypothetical protein | - |
| QMA0248_RS06770 (QMA0248_1371) | - | 1392177..1392416 (-) | 240 | Protein_1282 | ABC transporter ATP-binding protein | - |
| QMA0248_RS06775 (QMA0248_1372) | - | 1392499..1393674 (+) | 1176 | WP_003099060.1 | IS256 family transposase | - |
| QMA0248_RS06780 (QMA0248_1373) | - | 1393709..1394134 (-) | 426 | WP_016356089.1 | ATP-binding cassette domain-containing protein | - |
| QMA0248_RS06790 (QMA0248_1375) | - | 1394781..1395956 (+) | 1176 | WP_003099060.1 | IS256 family transposase | - |
| QMA0248_RS06795 (QMA0248_1376) | - | 1396059..1396850 (-) | 792 | WP_003101421.1 | hypothetical protein | - |
| QMA0248_RS06800 (QMA0248_1377) | - | 1396904..1397293 (-) | 390 | WP_003101424.1 | hypothetical protein | - |
| QMA0248_RS06805 (QMA0248_1378) | - | 1397494..1397970 (-) | 477 | WP_003101426.1 | NUDIX hydrolase | - |
| QMA0248_RS06810 (QMA0248_1379) | era | 1398042..1398941 (-) | 900 | WP_003101428.1 | GTPase Era | - |
| QMA0248_RS06815 (QMA0248_1380) | - | 1399069..1399476 (-) | 408 | WP_003101429.1 | diacylglycerol kinase family protein | - |
| QMA0248_RS06820 (QMA0248_1381) | ybeY | 1399457..1399954 (-) | 498 | WP_003101433.1 | rRNA maturation RNase YbeY | - |
| QMA0248_RS06825 (QMA0248_1382) | - | 1400047..1400619 (-) | 573 | WP_003101435.1 | uracil-DNA glycosylase family protein | - |
| QMA0248_RS06830 (QMA0248_1383) | - | 1400661..1401725 (-) | 1065 | WP_003101437.1 | PhoH family protein | - |
| QMA0248_RS06835 (QMA0248_1384) | - | 1401944..1403281 (+) | 1338 | WP_003101438.1 | MFS transporter | - |
| QMA0248_RS06840 (QMA0248_1385) | - | 1403332..1405104 (-) | 1773 | WP_016356091.1 | oleate hydratase | - |
| QMA0248_RS06845 (QMA0248_1386) | - | 1405275..1405490 (-) | 216 | WP_017794750.1 | YozE family protein | - |
| QMA0248_RS06850 (QMA0248_1387) | msrA | 1405501..1406025 (-) | 525 | WP_031239310.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| QMA0248_RS06855 (QMA0248_1388) | - | 1406103..1406957 (-) | 855 | WP_003101451.1 | S1 RNA-binding domain-containing protein | - |
| QMA0248_RS06860 (QMA0248_1389) | frr | 1407067..1407624 (-) | 558 | WP_003101453.1 | ribosome recycling factor | - |
| QMA0248_RS06865 (QMA0248_1390) | pyrH | 1407650..1408384 (-) | 735 | WP_003101454.1 | UMP kinase | - |
| QMA0248_RS06870 (QMA0248_1391) | rplA | 1408533..1409222 (-) | 690 | WP_003101458.1 | 50S ribosomal protein L1 | - |
| QMA0248_RS06875 (QMA0248_1392) | rplK | 1409327..1409752 (-) | 426 | WP_003101459.1 | 50S ribosomal protein L11 | - |
| QMA0248_RS06880 (QMA0248_1393) | - | 1410009..1411175 (+) | 1167 | WP_003099776.1 | IS30 family transposase | - |
| QMA0248_RS06885 (QMA0248_1394) | - | 1411508..1411858 (+) | 351 | WP_003101461.1 | DUF3397 family protein | - |
| QMA0248_RS06890 (QMA0248_1395) | - | 1411888..1414293 (-) | 2406 | WP_003101470.1 | FtsK/SpoIIIE family DNA translocase | - |
| QMA0248_RS06895 (QMA0248_1396) | - | 1414507..1415310 (+) | 804 | WP_003101471.1 | peptidylprolyl isomerase | - |
| QMA0248_RS06900 (QMA0248_1397) | - | 1415363..1416214 (-) | 852 | WP_003101472.1 | metal ABC transporter permease | - |
| QMA0248_RS06905 (QMA0248_1398) | - | 1416208..1416936 (-) | 729 | WP_003101473.1 | metal ABC transporter ATP-binding protein | - |
| QMA0248_RS06910 (QMA0248_1399) | - | 1417002..1417931 (-) | 930 | WP_003101474.1 | metal ABC transporter substrate-binding protein | - |
| QMA0248_RS06915 (QMA0248_1400) | - | 1418076..1418723 (+) | 648 | WP_003101475.1 | metal-dependent transcriptional regulator | - |
| QMA0248_RS06920 (QMA0248_1401) | - | 1418858..1419550 (-) | 693 | WP_003101476.1 | 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | - |
| QMA0248_RS06925 (QMA0248_1402) | macP | 1419562..1419822 (-) | 261 | WP_003101477.1 | cell wall synthase accessory phosphoprotein MacP | - |
| QMA0248_RS06930 (QMA0248_1403) | - | 1419825..1420376 (-) | 552 | WP_003101478.1 | NUDIX hydrolase | - |
| QMA0248_RS06935 (QMA0248_1404) | glmU | 1420395..1421780 (-) | 1386 | WP_003101479.1 | bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU | - |
| QMA0248_RS06940 (QMA0248_1405) | - | 1421881..1422846 (-) | 966 | WP_003101480.1 | Gfo/Idh/MocA family protein | - |
| QMA0248_RS06945 (QMA0248_1406) | - | 1422873..1423571 (-) | 699 | WP_003101481.1 | 3-oxoacyl-ACP reductase | - |
| QMA0248_RS06950 (QMA0248_1407) | - | 1423564..1423800 (-) | 237 | WP_003101483.1 | DUF2829 domain-containing protein | - |
| QMA0248_RS06955 (QMA0248_1408) | - | 1423883..1424170 (-) | 288 | Protein_1318 | tyrosine-type recombinase/integrase | - |
| QMA0248_RS10535 (QMA0248_2096) | - | 1424436..1424870 (+) | 435 | WP_225111322.1 | isochorismatase family protein | - |
| QMA0248_RS06965 (QMA0248_1409) | - | 1424996..1425322 (-) | 327 | WP_003101486.1 | hypothetical protein | - |
| QMA0248_RS06970 (QMA0248_1410) | - | 1425510..1426424 (-) | 915 | WP_003101487.1 | magnesium transporter CorA family protein | - |
| QMA0248_RS06975 (QMA0248_1411) | brnQ | 1426506..1427849 (-) | 1344 | WP_037583405.1 | branched-chain amino acid transport system II carrier protein | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 36613.69 Da Isoelectric Point: 5.7671
>NTDB_id=239000 QMA0248_RS06660 WP_003101380.1 1371532..1372533(-) (ccpA) [Streptococcus iniae strain QMA0248]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAVSEIVDILAENHQKIAFVSGPLIDDINGKVRLSGYKEGLKKNKLSYKEGLVFEAKYSYRDGFDLAQRVINSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIFTSNDSPVVEYTSPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKRRGTTK
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAVSEIVDILAENHQKIAFVSGPLIDDINGKVRLSGYKEGLKKNKLSYKEGLVFEAKYSYRDGFDLAQRVINSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIFTSNDSPVVEYTSPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKRRGTTK
Nucleotide
Download Length: 1002 bp
>NTDB_id=239000 QMA0248_RS06660 WP_003101380.1 1371532..1372533(-) (ccpA) [Streptococcus iniae strain QMA0248]
ATGAACACAGATGATACAATTACGATATATGATGTTGCTCGTGAAGCAGGTGTTTCAATGGCAACAGTCAGCCGTGTTGT
AAATGGTAATAAAAACGTTAAGGAAAATACCCGTAAGAAAGTTTTAGAAGTTATCGACCGTTTAGACTACCGCCCAAATG
CTGTAGCTAGAGGTCTAGCAAGTAAAAAAACAACAACAGTTGGTGTGGTTATTCCTAACATTGCTAATGCTTATTTTTCA
ATTTTGGCTAAAGGAATTGATGATATTGCAGCAATGTACAAATATAATATTGTTCTGGCATCTAGTGATGAGGATGATGA
TAAGGAAGTTAACGTTGTTAACACTTTGTTTGCAAAACAAGTTGATGGCATCATTTTTATGGGGCATCATTTAACAGAAA
AAATCCGTGCAGAGTTTTCTCGTTCACGGACACCTATTGTTCTTGCTGGAACAGTTGATTTAGAACATCAATTACCAAGT
GTTAATATTGATTACAAGGCGGCAGTTTCTGAAATTGTTGATATTTTGGCTGAAAACCATCAAAAAATTGCTTTTGTTTC
AGGACCGCTTATTGATGATATTAATGGAAAAGTAAGACTTTCAGGTTATAAAGAAGGCCTTAAAAAGAATAAATTAAGTT
ACAAAGAAGGCCTTGTTTTTGAAGCGAAATACTCATACAGAGACGGTTTTGACTTGGCACAACGTGTGATTAATTCAGGA
GCAACTGCTGCCTATGTTGGAGAAGATGAATTAGCAGCAGGTTTGTTAAATGGTCTTTTTGCAGCAGGTAAAAGTGTTCC
AGAAGATTTTGAGATTTTCACAAGTAATGATTCACCTGTTGTTGAATACACAAGCCCTAACTTAAGCTCAATCAGCCAAC
CAGTTTATGACTTAGGTGCTGTAAGTATGCGTATGTTAACAAAAATCATGAACAAAGAAGAACTTGAAGAAAAAGAAATC
CTGTTAAATCATGGCATTAAACGCCGTGGCACAACAAAATAA
ATGAACACAGATGATACAATTACGATATATGATGTTGCTCGTGAAGCAGGTGTTTCAATGGCAACAGTCAGCCGTGTTGT
AAATGGTAATAAAAACGTTAAGGAAAATACCCGTAAGAAAGTTTTAGAAGTTATCGACCGTTTAGACTACCGCCCAAATG
CTGTAGCTAGAGGTCTAGCAAGTAAAAAAACAACAACAGTTGGTGTGGTTATTCCTAACATTGCTAATGCTTATTTTTCA
ATTTTGGCTAAAGGAATTGATGATATTGCAGCAATGTACAAATATAATATTGTTCTGGCATCTAGTGATGAGGATGATGA
TAAGGAAGTTAACGTTGTTAACACTTTGTTTGCAAAACAAGTTGATGGCATCATTTTTATGGGGCATCATTTAACAGAAA
AAATCCGTGCAGAGTTTTCTCGTTCACGGACACCTATTGTTCTTGCTGGAACAGTTGATTTAGAACATCAATTACCAAGT
GTTAATATTGATTACAAGGCGGCAGTTTCTGAAATTGTTGATATTTTGGCTGAAAACCATCAAAAAATTGCTTTTGTTTC
AGGACCGCTTATTGATGATATTAATGGAAAAGTAAGACTTTCAGGTTATAAAGAAGGCCTTAAAAAGAATAAATTAAGTT
ACAAAGAAGGCCTTGTTTTTGAAGCGAAATACTCATACAGAGACGGTTTTGACTTGGCACAACGTGTGATTAATTCAGGA
GCAACTGCTGCCTATGTTGGAGAAGATGAATTAGCAGCAGGTTTGTTAAATGGTCTTTTTGCAGCAGGTAAAAGTGTTCC
AGAAGATTTTGAGATTTTCACAAGTAATGATTCACCTGTTGTTGAATACACAAGCCCTAACTTAAGCTCAATCAGCCAAC
CAGTTTATGACTTAGGTGCTGTAAGTATGCGTATGTTAACAAAAATCATGAACAAAGAAGAACTTGAAGAAAAAGAAATC
CTGTTAAATCATGGCATTAAACGCCGTGGCACAACAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ccpA | Streptococcus gordonii str. Challis substr. CH1 |
78.979 |
100 |
0.79 |
| ccpA | Streptococcus pneumoniae D39 |
77.177 |
100 |
0.772 |
| ccpA | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.381 |
99.399 |
0.541 |