Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | LPL_RS09925 | Genome accession | NC_006369 |
| Coordinates | 2214558..2214872 (-) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila str. Lens | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2209558..2219872
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPL_RS09900 (lpl1968) | - | 2209984..2210484 (-) | 501 | WP_011214243.1 | hypothetical protein | - |
| LPL_RS09905 (lpl1969) | - | 2210975..2211835 (+) | 861 | WP_011215957.1 | polysaccharide deacetylase family protein | - |
| LPL_RS09910 (lpl1970) | - | 2211959..2213149 (-) | 1191 | WP_011215958.1 | murein transglycosylase A | - |
| LPL_RS09915 (lpl1971) | lpp1976 | 2213259..2213816 (-) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| LPL_RS09920 (lpl1972) | lpp1977 | 2213813..2214619 (-) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| LPL_RS09925 (lpl1973) | lpp1978 | 2214558..2214872 (-) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| LPL_RS09930 (lpl1974) | hisC | 2215032..2216141 (+) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| LPL_RS09935 (lpl1975) | - | 2216178..2216519 (+) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| LPL_RS09940 (lpl1976) | secF | 2216709..2217626 (-) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| LPL_RS09945 (lpl1977) | secD | 2217639..2219495 (-) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| LPL_RS09950 (lpl1978) | yajC | 2219517..2219852 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=23854 LPL_RS09925 WP_011215961.1 2214558..2214872(-) (lpp1978) [Legionella pneumophila str. Lens]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=23854 LPL_RS09925 WP_011215961.1 2214558..2214872(-) (lpp1978) [Legionella pneumophila str. Lens]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |