Detailed information NTG0238396

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: C9I78_RS01325
• Genome accession: NZ_CP028141
• Coordinates: 261321..264143 (-)
• Length: 940 a.a.
• NCBI ID: WP_108745155.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain R14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 256321..269143

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C9I78_RS01315 (C9I78_01315)	-	258220..259341 (+)	1122	WP_057619616.1	alanine--glyoxylate aminotransferase family protein	-
C9I78_RS01320 (C9I78_01320)	-	259475..261253 (-)	1779	WP_053302082.1	PglL family O-oligosaccharyltransferase	-
C9I78_RS01325 (C9I78_01325)	uvrA	261321..264143 (-)	2823	WP_108745155.1	excinuclease ABC subunit UvrA	Machinery gene
C9I78_RS01330 (C9I78_01330)	galU	264281..265153 (-)	873	WP_005466627.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
C9I78_RS01335 (C9I78_01335)	qstR	265411..266055 (-)	645	WP_108744711.1	LuxR C-terminal-related transcriptional regulator	Regulator
C9I78_RS01340 (C9I78_01340)	ssb	266334..266864 (+)	531	WP_005466625.1	single-stranded DNA-binding protein	Machinery gene
C9I78_RS01345 (C9I78_01345)	-	267050..268366 (+)	1317	WP_108744712.1	site-specific integrase	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103910.19 Da
• Isoelectric Point: 6.5101

>NTDB_id=238396 C9I78_RS01325 WP_108745155.1 261321..264143(-) (uvrA) [Vibrio parahaemolyticus strain R14]
MDKIEVRGARTHNLKDINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHAPLAAQTVSQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GEEIIFSANFACPQCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPNRVIQDDSLSLAQGAIRGWDQKNYYYFQML
TSLADHYGFDLHAPFNSLPKKTQDVILKGSGRTEIEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALTFFQTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELLGATGNNLKNVDLSIPVGLFSCITGV
SGSGKSTLINDTFFKIAHIQLNGATTAHPSPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=238396 C9I78_RS01325 WP_108745155.1 261321..264143(-) (uvrA) [Vibrio parahaemolyticus strain R14]
ATGGATAAAATAGAAGTTCGCGGTGCCCGAACCCATAACCTCAAAGACATCAATCTGACTATCCCTCGCGATAAACTGAC
AGTAATTACTGGGTTAAGCGGCTCCGGTAAGTCCTCTCTCGCATTCGATACCTTATATGCAGAAGGCCAACGACGTTATG
TCGAATCACTGTCTGCTTATGCTCGTCAGTTTTTGTCTCTTATGGAAAAACCAGATGTCGACCATATAGAAGGTTTGTCT
CCGGCGATTTCTATTGAACAAAAATCGACATCGCATAACCCTCGCTCAACCGTCGGTACCATCACCGAAGTTTACGACTA
CTTACGTCTGCTTTACGCTCGTGTTGGTGAACCACGCTGTCCTACTCACCACGCCCCATTAGCCGCACAGACTGTCAGCC
AGATGGTGGATAAAGTACTGGAACTGCCAGAAGGCAGCAAAATGATGCTGCTTGCTCCAATCGTAAAAGAGCGCAAAGGT
GAGCATGTAAAAACACTAGAAAACCTTGCCGCACAAGGTTTTATTCGAGCGCGTATTGACGGCGAAACTTGCGATCTTTC
AGATCCTCCAACACTTGAGCTACACAAAAAACACACCATTGAAGTCGTGGTCGACCGATTCAAAGTTCGCCCAGATCTGC
AACAACGTTTAGCAGAGTCATTTGAGACGACGCTAGAGCTTTCTGGTGGTATTGCGGTGGTTGCTCCGATGGATGGCGAT
GGGGAAGAAATCATCTTTTCAGCGAACTTCGCTTGTCCGCAATGTGGCTACAGCATGCAAGAGCTGGAACCGAGATTGTT
CTCATTTAACAACCCAGCAGGCGCGTGTGGAACTTGTGATGGCTTGGGTGTACAACAGTATTTTGATCCAAACCGAGTGA
TTCAAGATGACTCACTCAGTTTGGCACAAGGTGCCATTCGTGGTTGGGATCAAAAGAATTACTATTACTTCCAAATGCTG
ACTTCATTGGCGGATCATTATGGATTTGATTTGCATGCTCCGTTCAACTCTCTGCCAAAGAAAACGCAAGACGTTATTCT
CAAAGGCTCAGGCCGCACCGAGATCGAGTTTAAATACATCAATGATCGCGGCGACATTCGTGTAAAGCGCCACCCATTCG
AAGGGATTTTAAATACGCTTGAACGTCGTTACCGCGACACCGAGTCCAACTCGGTTCGAGAAGAGTTGGCCAAATACATC
TCGACAAAATCATGCTCAAGCTGTGGCGGTACTCGTCTACGCCTTGAAGCACGTAATGTATTTATTGCCGATACCACCTT
ACCTGAGATCGTTGAGCTCAGTATTGCAGATGCCCTTACCTTCTTCCAAACACTCAAGCTAGAAGGTCAACGTGCGCAAA
TTGCAGAAAAGGTCATGAAGGAGATTAATGATCGTCTACAGTTCCTTGTAAATGTGGGCTTGAACTACCTTAATTTATCC
CGGAGTGCAGAGACGCTATCCGGTGGCGAAGCACAACGCATTCGCTTAGCGAGCCAAATTGGTGCAGGTCTTGTTGGTGT
CATGTACGTATTAGATGAACCGTCGATTGGCCTCCACCAGCGTGATAACGAACGACTCCTAAAAACACTGACTCATTTGC
GCGATTTAGGTAATACCGTACTCGTGGTAGAACACGATGAAGATGCCATTCGCTGTGCCGATCACGTGATTGATATTGGC
CCAGGAGCGGGGGTGCACGGCGGTAATGTGGTTGCCGAAGGAACCATGGACGAGATCATCGCCAACCCGAACTCTCTCAC
AGGTCAGTATCTGAGTGGCGCAAAAGAGATAGCAGTCCCTAAAGAGCGTACCCCTCGCGATCCAAAGAAAACCGTCGAGC
TACTAGGCGCAACAGGTAACAACCTGAAGAACGTCGACTTATCGATTCCTGTCGGATTGTTTAGCTGTATTACTGGCGTG
TCAGGCTCCGGTAAATCAACCTTGATCAACGATACGTTCTTCAAAATTGCACACATCCAGCTCAATGGCGCTACTACTGC
ACACCCATCGCCTTATAAGTCGATTAAAGGTCTAGAACATTTCGATAAGGTTATCGACATCGATCAAAGCCCAATTGGCC
GAACACCGCGCTCGAACCCAGCGACGTACACGGGAATCTTTACCCCTATTCGCGAGCTGTTTGCTGGTACGCAAGAATCA
CGTTCACGTGGTTACAAACCTGGCCGCTTTAGTTTTAACGTTCGTGGTGGTCGCTGTGAAGCTTGTCAGGGGGATGGTGT
TATCAAAGTCGAGATGCACTTCTTACCAGACGTGTACGTGCCATGTGATGTGTGTAAAGGGAAGCGCTATAACCGCGAAA
CACTGGAAGTACGCTACAAAGGCAAAACCATCGATGAAGTACTGGAAATGACCGTCGAGGATGCTCGCACCTTCTTCGAT
CCTGTTCCTGCGATTGCCCGCAAGCTGCAAACTCTAATGGACGTTGGTCTGTCTTACATTCGTTTAGGTCAAGCGGCAAC
CACATTATCAGGCGGCGAAGCGCAGCGAGTGAAATTGGCAAGAGAGCTATCCAAGCGTGATACGGGTAAAACCTTGTACA
TTCTAGATGAGCCAACAACTGGTCTGCACTTCCATGATATTCAGCAGCTATTAACTGTACTTCATCGCCTGCGCGATCAC
GGGAATACCGTTGTGGTTATCGAGCATAACTTGGACGTTATCAAAACAGCAGACTGGATCATCGACTTAGGACCAGAGGG
CGGACAAGGCGGCGGAGAGATCATTGCCCAGGGAACACCAGAAGATGTGTCTCAGATCGAAGGTTCGCACACAGCTCGAT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

• ABC transporter (ABC_tran) (622-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.749	100	0.579
uvrA	Streptococcus pneumoniae TIGR4	57.749	100	0.579
uvrA	Streptococcus pneumoniae D39	57.749	100	0.579