Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | CFH90_RS16355 | Genome accession | NZ_CP022298 |
| Coordinates | 3321941..3323365 (+) | Length | 474 a.a. |
| NCBI ID | WP_410169723.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain IC001 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3316941..3328365
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFH90_RS16335 (CFH90_16275) | thrC | 3317206..3318345 (+) | 1140 | WP_058868731.1 | threonine synthase | - |
| CFH90_RS16340 (CFH90_16280) | - | 3318432..3319487 (-) | 1056 | WP_126038636.1 | serine hydrolase | - |
| CFH90_RS16345 (CFH90_16285) | - | 3319703..3320338 (+) | 636 | WP_004692836.1 | response regulator | - |
| CFH90_RS16350 (CFH90_16290) | pilS | 3320360..3321928 (+) | 1569 | WP_126038639.1 | sensor histidine kinase | Regulator |
| CFH90_RS16355 (CFH90_16295) | pilR | 3321941..3323365 (+) | 1425 | WP_410169723.1 | sigma-54-dependent transcriptional regulator | Regulator |
| CFH90_RS16360 (CFH90_16300) | - | 3323370..3324545 (-) | 1176 | WP_126038645.1 | S41 family peptidase | - |
| CFH90_RS16365 (CFH90_16305) | gpmI | 3324564..3326111 (-) | 1548 | WP_126038648.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| CFH90_RS16370 (CFH90_16310) | lptG | 3326235..3327305 (-) | 1071 | WP_004692843.1 | LPS export ABC transporter permease LptG | - |
Sequence
Protein
Download Length: 474 a.a. Molecular weight: 53361.47 Da Isoelectric Point: 6.5065
>NTDB_id=238215 CFH90_RS16355 WP_410169723.1 3321941..3323365(+) (pilR) [Acinetobacter johnsonii strain IC001]
MVEKKPLVLLVDDEQDLCTLMQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPV
AVLTAYGNMDIAIAALKAGAFDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARS
QAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLTMQVKLLRAVQEKRIRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIIL
LAQHFIQKICQEWDIPVKPLSERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYTNATQQ
GTVGNDQLSHVPSRKLPEEGLELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV
MVEKKPLVLLVDDEQDLCTLMQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPV
AVLTAYGNMDIAIAALKAGAFDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARS
QAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLTMQVKLLRAVQEKRIRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIIL
LAQHFIQKICQEWDIPVKPLSERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYTNATQQ
GTVGNDQLSHVPSRKLPEEGLELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV
Nucleotide
Download Length: 1425 bp
>NTDB_id=238215 CFH90_RS16355 WP_410169723.1 3321941..3323365(+) (pilR) [Acinetobacter johnsonii strain IC001]
ATCGTGGAAAAAAAACCACTTGTTTTATTGGTGGATGACGAACAAGACTTATGTACACTGATGCAAATGTCTTTAAGTCG
GATGGGGATTGATACACATATTGCCTATCGCTTACAAGAGGCGGTTCAAGCCCTGAAAACGCATCAATATGATGCCTGTC
TAACCGATCTTAATTTACCCGATGGTAATGGCCTGAGCTTGGTCGATTTTATTGCTCAAAATTATCCTAATTTACCCGTT
GCAGTGCTGACTGCTTACGGCAATATGGATATTGCGATTGCAGCACTGAAAGCTGGTGCTTTTGATTTTGTCAGTAAACC
GATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAGCCCATCAGTCAGCTGCATATCCAAGAAGATA
CACTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCAACAACTACGCATCACCTTAAAGAAAATTGCACGCTCG
CAAGCCCCTGTCTTTATTACGGGTGAATCAGGCACGGGCAAAGAAGTGGTGGCGAATCTGGTACATCGCCTGAGCAATCG
CAATGAAGGGCCATTTATTGCCATCAACTGCGGTGCCATACCGACTGAACTGATGGAAAGTGAATTGTTTGGACACCGTA
AGGGTAGCTTTACAGGAGCGACTCAAGACAAACAGGGGCTGATTCTGTCTGCGCATGGCGGCAGTTTATTTTTAGATGAA
ATTGCTGAATTACCGCTCACTATGCAGGTGAAACTATTGCGCGCGGTACAAGAAAAACGCATTCGCCCAATTGGGAGTGA
CACCGAAATTGATGTCGATTTTCGTGTGATTAGTGCCAGCCATCAAGACTTAGAAGCACTGGTGCAACAAGGCAAGTTCC
GTCAGGATTTGTACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCTCTACGTGAGCGTGGCAATGACATTATTCTT
TTGGCACAACATTTCATTCAAAAAATCTGCCAAGAATGGGACATCCCTGTCAAACCACTGAGTGAACGTGCACGTGAGTT
TTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAACTACGCAACATGATGGAACGTGCCATCACCTTAAGTGATGAAA
GCAGTATCGACTTACCACACTTGCAAACAGCCCCACTGCGACCGATTGCTCAGACCAACTATACCAATGCCACGCAACAA
GGTACTGTTGGCAATGATCAACTCAGTCATGTCCCTTCACGTAAATTGCCCGAAGAGGGTTTAGAGCTGTATTTAGAAAA
AATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCATTGGAACAGAACACTAGCGGCTAAAAAGCTCGGTATGT
CTTTCCGCTCTTTACGTTATCGCTTGAAAAAATTTGGGTTAGATGGCGAAGACGATTCCGTTTAA
ATCGTGGAAAAAAAACCACTTGTTTTATTGGTGGATGACGAACAAGACTTATGTACACTGATGCAAATGTCTTTAAGTCG
GATGGGGATTGATACACATATTGCCTATCGCTTACAAGAGGCGGTTCAAGCCCTGAAAACGCATCAATATGATGCCTGTC
TAACCGATCTTAATTTACCCGATGGTAATGGCCTGAGCTTGGTCGATTTTATTGCTCAAAATTATCCTAATTTACCCGTT
GCAGTGCTGACTGCTTACGGCAATATGGATATTGCGATTGCAGCACTGAAAGCTGGTGCTTTTGATTTTGTCAGTAAACC
GATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAGCCCATCAGTCAGCTGCATATCCAAGAAGATA
CACTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCAACAACTACGCATCACCTTAAAGAAAATTGCACGCTCG
CAAGCCCCTGTCTTTATTACGGGTGAATCAGGCACGGGCAAAGAAGTGGTGGCGAATCTGGTACATCGCCTGAGCAATCG
CAATGAAGGGCCATTTATTGCCATCAACTGCGGTGCCATACCGACTGAACTGATGGAAAGTGAATTGTTTGGACACCGTA
AGGGTAGCTTTACAGGAGCGACTCAAGACAAACAGGGGCTGATTCTGTCTGCGCATGGCGGCAGTTTATTTTTAGATGAA
ATTGCTGAATTACCGCTCACTATGCAGGTGAAACTATTGCGCGCGGTACAAGAAAAACGCATTCGCCCAATTGGGAGTGA
CACCGAAATTGATGTCGATTTTCGTGTGATTAGTGCCAGCCATCAAGACTTAGAAGCACTGGTGCAACAAGGCAAGTTCC
GTCAGGATTTGTACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCTCTACGTGAGCGTGGCAATGACATTATTCTT
TTGGCACAACATTTCATTCAAAAAATCTGCCAAGAATGGGACATCCCTGTCAAACCACTGAGTGAACGTGCACGTGAGTT
TTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAACTACGCAACATGATGGAACGTGCCATCACCTTAAGTGATGAAA
GCAGTATCGACTTACCACACTTGCAAACAGCCCCACTGCGACCGATTGCTCAGACCAACTATACCAATGCCACGCAACAA
GGTACTGTTGGCAATGATCAACTCAGTCATGTCCCTTCACGTAAATTGCCCGAAGAGGGTTTAGAGCTGTATTTAGAAAA
AATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCATTGGAACAGAACACTAGCGGCTAAAAAGCTCGGTATGT
CTTTCCGCTCTTTACGTTATCGCTTGAAAAAATTTGGGTTAGATGGCGAAGACGATTCCGTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
74.684 |
100 |
0.747 |
| pilR | Pseudomonas aeruginosa PAK |
49.353 |
97.89 |
0.483 |