Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   CFH90_RS11540 Genome accession   NZ_CP022298
Coordinates   2348445..2349152 (+) Length   235 a.a.
NCBI ID   WP_004696183.1    Uniprot ID   A0A7H8SJ59
Organism   Acinetobacter johnsonii strain IC001     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2343445..2354152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFH90_RS18765 - 2344113..2344676 (-) 564 WP_228256427.1 hypothetical protein -
  CFH90_RS11530 (CFH90_11470) clpB 2344905..2347484 (-) 2580 WP_126037215.1 ATP-dependent chaperone ClpB -
  CFH90_RS11535 (CFH90_11475) - 2347875..2348297 (-) 423 WP_126037217.1 OsmC family protein -
  CFH90_RS11540 (CFH90_11480) crp 2348445..2349152 (+) 708 WP_004696183.1 cAMP-activated global transcriptional regulator CRP Regulator
  CFH90_RS11545 (CFH90_11485) - 2349354..2350403 (+) 1050 WP_126037219.1 NADP(H)-dependent aldo-keto reductase -
  CFH90_RS11550 (CFH90_11490) - 2350528..2351301 (-) 774 WP_004982314.1 M48 family metallopeptidase -
  CFH90_RS11555 (CFH90_11495) - 2351486..2351791 (-) 306 WP_004696180.1 hypothetical protein -
  CFH90_RS11560 (CFH90_11500) - 2351993..2353312 (-) 1320 WP_004696178.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26414.97 Da        Isoelectric Point: 4.6788

>NTDB_id=238203 CFH90_RS11540 WP_004696183.1 2348445..2349152(+) (crp) [Acinetobacter johnsonii strain IC001]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEESKANADDYEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=238203 CFH90_RS11540 WP_004696183.1 2348445..2349152(+) (crp) [Acinetobacter johnsonii strain IC001]
ATGACTTCAAGCTTTTCACAATTAAGCACTGATGCGCTGTCTCCAGGTCAACTCCCCGAGTCAGTCAAAGCATTATTAAA
ACGCGCATATATTAATCGTTATCCTAAGCGTACCACCATCGTAGATGCAGGCTCAGAATCTAAATCTTTATATTTGATTT
TAAAAGGTTCGGTCTCCATTATTCTGCGTGAAGACGATGAACGTGAAATCGTGGTCGCTTATTTAAATGCGGGTGATTTT
TTTGGGGAAATGGGGCTATTCGAAGCAAACTCACAACGCACTGCTGAAGTGCGTACCCGTGATGTCTGCGAAATTGCTGA
AGTAACTTATGAAAACTTCCATGAACTCAGCAAGCAATACCCTGACCTAAGCTATGCAGTATTTGCACAGCTGGTACGCC
GTCTAAAAAATACCACACGTAAAGTGACTGACCTTGCATTTATCGATGTTTCAGGTCGTATTGCACGTTGCCTAATCGAC
TTATCGTCGCAACCTGAAGCGATGATTTTACCAAATGGCCGCCAAATTCGTATTACACGTCAAGAGATTGGACGTATTGT
CGGTTGTTCACGTGAAATGGTTGGTCGTGTTTTGAAAACACTCGAAGAGCAAGGCATGATCGAAACTGATGGTAAAGCCA
TCTTAATTTTTGATGCCTCTTTAGAAGAGTCAAAAGCGAATGCTGATGACTATGAAGACGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SJ59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

46.602

87.66

0.409
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4

Multiple sequence alignment