Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | CFH90_RS01805 | Genome accession | NZ_CP022298 |
| Coordinates | 369814..370470 (+) | Length | 218 a.a. |
| NCBI ID | WP_004691498.1 | Uniprot ID | A0A380U6M1 |
| Organism | Acinetobacter johnsonii strain IC001 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 364814..375470
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFH90_RS01790 (CFH90_01775) | - | 365224..366030 (+) | 807 | WP_126035043.1 | putative RNA methyltransferase | - |
| CFH90_RS01795 (CFH90_01780) | ponA | 366062..368590 (-) | 2529 | WP_126035045.1 | penicillin-binding protein PBP1a | - |
| CFH90_RS01800 (CFH90_01785) | pilM | 368756..369814 (+) | 1059 | WP_058870420.1 | pilus assembly protein PilM | Machinery gene |
| CFH90_RS01805 (CFH90_01790) | pilN | 369814..370470 (+) | 657 | WP_004691498.1 | PilN domain-containing protein | Machinery gene |
| CFH90_RS01810 (CFH90_01795) | pilO | 370467..371189 (+) | 723 | WP_126035047.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CFH90_RS01815 (CFH90_01800) | pilP | 371189..371716 (+) | 528 | WP_126035049.1 | pilus assembly protein PilP | Machinery gene |
| CFH90_RS01820 (CFH90_01805) | pilQ | 371781..373814 (+) | 2034 | WP_410169713.1 | type IV pilus secretin PilQ | Machinery gene |
| CFH90_RS01825 (CFH90_01810) | aroK | 373852..374385 (+) | 534 | WP_125280899.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 218 a.a. Molecular weight: 24225.67 Da Isoelectric Point: 5.4468
>NTDB_id=238181 CFH90_RS01805 WP_004691498.1 369814..370470(+) (pilN) [Acinetobacter johnsonii strain IC001]
MAKINLLPWRDALREKRKKEFIAYCVGAALVGVLAVALAWFFYSQKLEDQEQANQLVVSTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQGQRPVAVRLVDEMVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLV
AEEKKDKAPSSIVPRVEETYGTFVVTADLDEIAQPVAPNATTPEAASTVNNSTAGAAQ
MAKINLLPWRDALREKRKKEFIAYCVGAALVGVLAVALAWFFYSQKLEDQEQANQLVVSTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQGQRPVAVRLVDEMVRVTPSNMYITKFVRTGDKFTIEGKAESPNTVAEFLRNLEASAWYRNAFMNSFLV
AEEKKDKAPSSIVPRVEETYGTFVVTADLDEIAQPVAPNATTPEAASTVNNSTAGAAQ
Nucleotide
Download Length: 657 bp
>NTDB_id=238181 CFH90_RS01805 WP_004691498.1 369814..370470(+) (pilN) [Acinetobacter johnsonii strain IC001]
ATGGCAAAAATAAACCTACTCCCTTGGCGTGATGCGTTAAGAGAGAAACGAAAAAAAGAATTTATTGCCTATTGTGTTGG
GGCTGCATTAGTTGGGGTTTTAGCTGTTGCTTTGGCTTGGTTCTTTTACAGTCAAAAACTGGAAGATCAAGAACAAGCTA
ATCAGTTGGTGGTGAGTACCAATCAAAACTTAGATGTTCAATTAAAGTCATTGGAAGGTCTGCAAGAGCAGCGCAATGCG
ATTGTTGAACGGATGAAGTTGATCCAAGGTTTGCAAGGTCAACGCCCTGTGGCTGTGCGTTTGGTCGATGAAATGGTACG
TGTCACACCAAGTAATATGTACATTACTAAGTTTGTGCGTACGGGTGATAAATTTACCATTGAAGGGAAAGCGGAAAGCC
CGAATACGGTTGCGGAATTCTTACGAAATCTCGAAGCATCGGCGTGGTATCGCAATGCCTTTATGAATTCATTCTTGGTT
GCTGAAGAGAAAAAAGATAAAGCACCAAGTTCCATCGTGCCACGTGTTGAAGAAACCTATGGCACCTTTGTGGTCACGGC
AGATTTAGATGAGATTGCACAGCCAGTAGCGCCTAATGCGACGACACCTGAAGCCGCAAGTACAGTTAATAATTCAACAG
CGGGGGCAGCACAATGA
ATGGCAAAAATAAACCTACTCCCTTGGCGTGATGCGTTAAGAGAGAAACGAAAAAAAGAATTTATTGCCTATTGTGTTGG
GGCTGCATTAGTTGGGGTTTTAGCTGTTGCTTTGGCTTGGTTCTTTTACAGTCAAAAACTGGAAGATCAAGAACAAGCTA
ATCAGTTGGTGGTGAGTACCAATCAAAACTTAGATGTTCAATTAAAGTCATTGGAAGGTCTGCAAGAGCAGCGCAATGCG
ATTGTTGAACGGATGAAGTTGATCCAAGGTTTGCAAGGTCAACGCCCTGTGGCTGTGCGTTTGGTCGATGAAATGGTACG
TGTCACACCAAGTAATATGTACATTACTAAGTTTGTGCGTACGGGTGATAAATTTACCATTGAAGGGAAAGCGGAAAGCC
CGAATACGGTTGCGGAATTCTTACGAAATCTCGAAGCATCGGCGTGGTATCGCAATGCCTTTATGAATTCATTCTTGGTT
GCTGAAGAGAAAAAAGATAAAGCACCAAGTTCCATCGTGCCACGTGTTGAAGAAACCTATGGCACCTTTGTGGTCACGGC
AGATTTAGATGAGATTGCACAGCCAGTAGCGCCTAATGCGACGACACCTGAAGCCGCAAGTACAGTTAATAATTCAACAG
CGGGGGCAGCACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
69.378 |
95.872 |
0.665 |
| comN | Acinetobacter baylyi ADP1 |
73.604 |
90.367 |
0.665 |