Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CFN12_RS08355 | Genome accession | NZ_CP022290 |
| Coordinates | 1631275..1631574 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain EDCC5458 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1626275..1636574
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFN12_RS08330 (CFN12_08295) | gcvPA | 1627487..1628833 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CFN12_RS08335 (CFN12_08300) | gcvT | 1628853..1629944 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CFN12_RS08340 (CFN12_08305) | - | 1630103..1630627 (-) | 525 | WP_100183654.1 | shikimate kinase | - |
| CFN12_RS08345 (CFN12_08310) | - | 1630617..1630763 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CFN12_RS08350 (CFN12_08315) | comGF | 1630860..1631357 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CFN12_RS08355 (CFN12_08320) | comGE | 1631275..1631574 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| CFN12_RS08360 (CFN12_08325) | comGD | 1631561..1632007 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CFN12_RS08365 (CFN12_08330) | comGC | 1631985..1632296 (-) | 312 | WP_100183655.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CFN12_RS08370 (CFN12_08335) | comGB | 1632310..1633380 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CFN12_RS08375 (CFN12_08340) | comGA | 1633352..1634326 (-) | 975 | WP_054104768.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CFN12_RS08380 (CFN12_08345) | - | 1634378..1635001 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| CFN12_RS08385 (CFN12_08350) | - | 1634998..1635327 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CFN12_RS08390 (CFN12_08355) | - | 1635327..1636313 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| CFN12_RS08395 (CFN12_08360) | - | 1636310..1636513 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=238051 CFN12_RS08355 WP_000844413.1 1631275..1631574(-) (comGE) [Staphylococcus aureus strain EDCC5458]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=238051 CFN12_RS08355 WP_000844413.1 1631275..1631574(-) (comGE) [Staphylococcus aureus strain EDCC5458]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |