Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | LPP_RS04960 | Genome accession | NC_006368 |
| Coordinates | 1096963..1097562 (+) | Length | 199 a.a. |
| NCBI ID | WP_011213355.1 | Uniprot ID | - |
| Organism | Legionella pneumophila str. Paris | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1091963..1102562
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPP_RS04945 (lpp0988) | - | 1093909..1094916 (-) | 1008 | WP_011213352.1 | hypothetical protein | - |
| LPP_RS04950 (lpp0989) | pilM | 1095333..1096397 (+) | 1065 | WP_011213353.1 | type IV pilus assembly protein PilM | Machinery gene |
| LPP_RS04955 (lpp0990) | pilN | 1096401..1096949 (+) | 549 | WP_011213354.1 | PilN domain-containing protein | Machinery gene |
| LPP_RS04960 (lpp0991) | pilO | 1096963..1097562 (+) | 600 | WP_011213355.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LPP_RS04965 (lpp0992) | pilP | 1097559..1098143 (+) | 585 | WP_011213356.1 | pilus assembly protein PilP | Machinery gene |
| LPP_RS04970 (lpp0993) | pilQ | 1098147..1100243 (+) | 2097 | WP_011213357.1 | type IV pilus secretin PilQ | Machinery gene |
| LPP_RS04975 (lpp0994) | aroK | 1100689..1101216 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| LPP_RS04980 (lpp0995) | aroB | 1101203..1102312 (+) | 1110 | WP_011213358.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22523.24 Da Isoelectric Point: 5.3369
>NTDB_id=23802 LPP_RS04960 WP_011213355.1 1096963..1097562(+) (pilO) [Legionella pneumophila str. Paris]
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=23802 LPP_RS04960 WP_011213355.1 1096963..1097562(+) (pilO) [Legionella pneumophila str. Paris]
ATGGACACGGTCAATTTAAATGAATTAACTCTAGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGCTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACCTTGCATGAATTTAGTGTTGAGGGGGTATCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCCATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAATGAATTAACTCTAGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGCTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACCTTGCATGAATTTAGTGTTGAGGGGGTATCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCCATCACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
100 |
100 |
1 |
| comO | Acinetobacter baylyi ADP1 |
39.791 |
95.98 |
0.382 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |