Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   BG910_RS07280 Genome accession   NZ_CP022278
Coordinates   1471728..1472423 (+) Length   231 a.a.
NCBI ID   WP_089036273.1    Uniprot ID   A0A220S2B2
Organism   Neisseria chenwenguii strain 10023     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1466728..1477423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG910_RS12300 - 1466943..1467065 (-) 123 WP_123805981.1 class IIb bacteriocin, lactobin A/cerein 7B family -
  BG910_RS12995 - 1467416..1467538 (-) 123 WP_269766450.1 hypothetical protein -
  BG910_RS07270 (BG910_07260) lysS 1468028..1469539 (+) 1512 WP_089036271.1 lysine--tRNA ligase -
  BG910_RS07275 (BG910_07265) murJ 1469883..1471424 (-) 1542 WP_089036272.1 murein biosynthesis integral membrane protein MurJ -
  BG910_RS07280 (BG910_07270) dsbA1 1471728..1472423 (+) 696 WP_089036273.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  BG910_RS07285 (BG910_07275) - 1472535..1473905 (-) 1371 WP_089036274.1 chloride channel protein -
  BG910_RS12305 - 1473886..1474026 (+) 141 WP_157694049.1 hypothetical protein -
  BG910_RS07290 (BG910_07280) - 1474385..1474873 (-) 489 WP_089036275.1 peroxiredoxin -
  BG910_RS07295 (BG910_07285) - 1474870..1475256 (-) 387 WP_089036276.1 thioesterase family protein -
  BG910_RS07300 (BG910_07290) - 1475256..1475618 (-) 363 WP_089037183.1 VacJ -
  BG910_RS13000 - 1475742..1476140 (-) 399 WP_267897804.1 ABC transporter ATP-binding protein -
  BG910_RS13005 - 1476202..1476477 (-) 276 Protein_1449 ATP-binding cassette domain-containing protein -
  BG910_RS07310 (BG910_07300) - 1476481..1477354 (-) 874 Protein_1450 FecCD family ABC transporter permease -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25278.07 Da        Isoelectric Point: 6.1305

>NTDB_id=237852 BG910_RS07280 WP_089036273.1 1471728..1472423(+) (dsbA1) [Neisseria chenwenguii strain 10023]
MTLKKIALTTLAVFALAACEQKKAETSVPATGAAASAPAAPVTLIEGTNYTVLPNAIPQQQADKVEVLEFFGYFCPHCAH
LEPVLSKHVKTFKPDTYLSSEHVVWGDEMKPLARLAAAVEMTGEREKADSAIFNAMVEQKIKLNDEATLKNWLAQQTAFD
GKKVLSAYENPESQTRADKMAELTKTYQIDGTPAVIVGGKYKVEFSDWESGMKVIDLLVDKVREEKKAAAK

Nucleotide


Download         Length: 696 bp        

>NTDB_id=237852 BG910_RS07280 WP_089036273.1 1471728..1472423(+) (dsbA1) [Neisseria chenwenguii strain 10023]
ATGACTTTGAAAAAAATCGCCCTCACCACACTCGCCGTTTTCGCGCTGGCTGCCTGCGAACAGAAAAAAGCAGAAACCAG
CGTACCCGCCACCGGCGCCGCCGCATCCGCCCCCGCCGCGCCCGTTACCCTGATTGAGGGCACCAACTACACCGTACTGC
CCAACGCCATTCCGCAGCAGCAGGCCGACAAAGTCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCCCAT
CTTGAACCCGTGTTGAGCAAACACGTCAAAACCTTCAAACCCGATACCTACCTGAGCAGCGAACATGTTGTTTGGGGCGA
CGAAATGAAACCGTTGGCCCGCCTCGCCGCCGCGGTTGAAATGACCGGCGAACGCGAAAAAGCCGACAGCGCGATTTTCA
ACGCCATGGTCGAACAAAAAATCAAACTCAACGACGAAGCCACGCTGAAAAACTGGCTCGCCCAGCAAACCGCGTTTGAC
GGCAAAAAAGTTTTGTCGGCCTACGAAAACCCCGAAAGCCAAACCCGCGCCGACAAAATGGCGGAGCTGACCAAAACCTA
CCAAATCGACGGCACGCCTGCGGTGATTGTCGGCGGCAAATACAAAGTGGAATTTTCCGACTGGGAATCCGGTATGAAAG
TCATCGACCTGCTGGTGGATAAAGTCCGCGAAGAGAAAAAAGCGGCGGCAAAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(62-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A220S2B2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

68.831

100

0.688
  dsbA2 Neisseria meningitidis MC58

71.635

90.043

0.645

Multiple sequence alignment