Detailed information NTG0237833

Bioinformatically predicted

Overview

• Name: comL
• Type: Machinery gene
• Locus tag: BG910_RS01430
• Genome accession: NZ_CP022278
• Coordinates: 293778..294584 (+)
• Length: 268 a.a.
• NCBI ID: WP_089035306.1
• Uniprot ID: A0A220RZI6
• Organism: Neisseria chenwenguii strain 10023
• Function: DNA processing; DNA transport into the cytoplasm (predicted from homology) DNA processing DNA binding and uptake

Genomic Context

Location: 288778..299584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BG910_RS01400 (BG910_01400)	istB	288955..289683 (+)	729	WP_332457770.1	IS21-like element helper ATPase IstB	-
BG910_RS01405 (BG910_01405)	-	289852..290514 (-)	663	WP_089035302.1	alpha/beta hydrolase	-
BG910_RS01410 (BG910_01410)	-	290514..291140 (-)	627	WP_232462219.1	DsbA family oxidoreductase	-
BG910_RS01415 (BG910_01415)	-	291281..291592 (-)	312	WP_089035304.1	helix-turn-helix transcriptional regulator	-
BG910_RS12675	-	291954..292427 (+)	474	WP_232462220.1	DDE-type integrase/transposase/recombinase	-
BG910_RS12680	-	292424..292564 (+)	141	WP_232462221.1	hypothetical protein	-
BG910_RS01425 (BG910_01425)	rluD	292655..293779 (-)	1125	WP_089035305.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
BG910_RS01430 (BG910_01430)	comL	293778..294584 (+)	807	WP_089035306.1	outer membrane protein assembly factor BamD	Machinery gene
BG910_RS01435 (BG910_01435)	-	294768..295007 (+)	240	WP_123806059.1	hypothetical protein	-
BG910_RS01440 (BG910_01440)	dapC	295205..296392 (+)	1188	WP_089035308.1	succinyldiaminopimelate transaminase	-
BG910_RS01445 (BG910_01445)	yaaA	296771..297541 (+)	771	WP_089035309.1	peroxide stress protein YaaA	-
BG910_RS01465 (BG910_01465)	ruvX	298253..298714 (-)	462	WP_089035310.1	Holliday junction resolvase RuvX	-
BG910_RS01470 (BG910_01470)	-	298707..299255 (-)	549	WP_089035311.1	YqgE/AlgH family protein	-

Sequence

Protein

• Length: 268 a.a.
• Molecular weight: 31067.09 Da
• Isoelectric Point: 8.8701

>NTDB_id=237833 BG910_RS01430 WP_089035306.1 293778..294584(+) (comL) [Neisseria chenwenguii strain 10023]
MKKILLVVSLSLALGACAGTKGAADKDAQITQDWSVDKLYKEAQDELNSNNYTRAVKLYEILESRFPDGRYAQQAQLDTA
YAYYKDDEPEKALAAIERFQRQYPQHPNTDYALYLKGLVLFNEDKSFLNKLASQDWSDRDPKANRDAYQSFAQLVQQYPD
SKYAADATERMTRLVDALGGNEMAVARYYMKRGAYLAAVNRAQKIVERYQNTRYVEESLAMMELAYQKMGKQQLAGDTRR
ILAQNFPKSPFLTHPWQPNDMPWWRYWK

Nucleotide

• Length: 807 bp

>NTDB_id=237833 BG910_RS01430 WP_089035306.1 293778..294584(+) (comL) [Neisseria chenwenguii strain 10023]
ATGAAAAAAATTCTTTTAGTCGTTTCTTTAAGTTTGGCTCTGGGCGCTTGCGCCGGTACGAAAGGCGCGGCCGATAAAGA
CGCCCAAATCACTCAGGATTGGAGTGTGGACAAGCTCTACAAGGAAGCGCAGGACGAATTGAACAGCAACAATTATACGC
GAGCTGTAAAATTATACGAAATCCTCGAATCCCGTTTCCCCGACGGCCGTTACGCCCAGCAGGCGCAGCTTGACACGGCC
TACGCCTACTATAAAGACGACGAGCCGGAAAAAGCGCTGGCCGCCATCGAGCGCTTCCAACGCCAATATCCCCAACACCC
CAACACCGACTATGCGCTTTACCTCAAAGGCCTGGTTTTGTTTAACGAAGACAAATCCTTCCTCAACAAACTCGCCTCGC
AAGACTGGTCGGACCGCGACCCCAAAGCCAACCGTGATGCCTATCAGTCGTTTGCCCAACTGGTTCAGCAATACCCCGAC
AGCAAATACGCTGCCGACGCCACCGAACGCATGACCCGTCTGGTTGACGCGCTGGGTGGTAACGAAATGGCCGTTGCCCG
CTACTACATGAAACGCGGCGCCTATCTCGCCGCCGTCAATCGCGCGCAGAAAATTGTCGAGCGCTATCAAAACACCCGCT
ATGTGGAAGAATCGCTGGCGATGATGGAACTGGCCTATCAAAAAATGGGCAAACAGCAGCTTGCCGGCGACACCCGCCGC
ATCCTCGCGCAAAACTTCCCGAAAAGCCCGTTCTTGACCCATCCGTGGCAGCCAAACGATATGCCGTGGTGGCGTTATTG
GAAATAA

Domains

Predicted by InterproScan.

• Outer membrane lipoprotein (YfiO) (35-238)

3D structure

• AlphaFold DB: A0A220RZI6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comL	Neisseria gonorrhoeae MS11	81.273	99.627	0.81
comL	Neisseria meningitidis MC58	79.775	99.627	0.795