Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   C7M53_RS07015 Genome accession   NZ_CP027789
Coordinates   1376444..1377742 (-) Length   432 a.a.
NCBI ID   WP_119953954.1    Uniprot ID   -
Organism   Bacillus licheniformis strain TAB7     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1371444..1382742
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M53_RS06995 (C7M53_06990) - 1371992..1372876 (+) 885 WP_003180929.1 carbohydrate ABC transporter permease -
  C7M53_RS07000 (C7M53_06995) - 1372914..1374242 (-) 1329 WP_009328706.1 APC family permease -
  C7M53_RS07005 (C7M53_07000) - 1374562..1375515 (+) 954 WP_011197826.1 ring-cleaving dioxygenase -
  C7M53_RS07010 (C7M53_07005) - 1375908..1376270 (+) 363 WP_003180937.1 hypothetical protein -
  C7M53_RS07015 (C7M53_07010) htrA 1376444..1377742 (-) 1299 WP_119953954.1 S1C family serine protease Regulator
  C7M53_RS07020 (C7M53_07015) proG 1377901..1378713 (+) 813 WP_011197828.1 pyrroline-5-carboxylate reductase ProG -
  C7M53_RS07025 (C7M53_07020) - 1378929..1379753 (+) 825 WP_009328702.1 M55 family metallopeptidase -
  C7M53_RS07030 (C7M53_07025) - 1379769..1380695 (+) 927 WP_009328701.1 ABC transporter permease -
  C7M53_RS07035 (C7M53_07030) - 1380700..1381659 (+) 960 WP_009328700.1 ABC transporter permease -
  C7M53_RS07040 (C7M53_07035) - 1381667..1382665 (+) 999 WP_061565954.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 432 a.a.        Molecular weight: 45575.82 Da        Isoelectric Point: 4.9024

>NTDB_id=237370 C7M53_RS07015 WP_119953954.1 1376444..1377742(-) (htrA) [Bacillus licheniformis strain TAB7]
MEYNREDQLETKNELIVSDQKPDQAIKKAEQQKRRLSWMTPILSGIIGGSLVLGVTTYQHSKDETANTSVQTQTNETSNS
SASSTKANTEKLSSTNSSDISTMVENVSPAIVGISNYQKQTESGMFGFESNSSSSSEQETGTGSGVIYKKANGKAYIITN
NHVVEGASKLTVSLSNGKEVEGKLLGSDSLTDLAVVKISADHVEKVASFGDSSSLKAGESVIAIGNPLGKDLSRTVTQGI
ISGVDRTVSVDTSAGQTEMNVIQTDAAINPGNSGGALLNTKGEVIGINSMKISESGVEGIGFAIPSNDVKPIAEELMSKG
KIERPFIGIGMMDLEQVPENYQTGTLGLSGSQLNKGVYIRQVASGSPAEKAGLKENDVIVSFNGKETDTGSALRNLLYND
AKIGDTVKVTLIRNGKTMTKQITLDQKESASS

Nucleotide


Download         Length: 1299 bp        

>NTDB_id=237370 C7M53_RS07015 WP_119953954.1 1376444..1377742(-) (htrA) [Bacillus licheniformis strain TAB7]
ATGGAATATAATAGAGAAGATCAGCTTGAAACAAAAAACGAACTCATCGTCTCCGATCAAAAGCCCGACCAGGCGATAAA
AAAAGCAGAACAGCAAAAGCGGAGACTCTCGTGGATGACGCCGATTCTCAGCGGCATCATCGGAGGAAGCCTCGTTCTCG
GCGTCACGACATACCAGCATAGCAAAGACGAAACGGCCAATACATCCGTCCAGACGCAAACAAACGAGACGTCGAACTCA
TCGGCTTCTTCCACTAAAGCGAATACCGAAAAATTGTCCAGCACCAATTCGTCCGACATTTCTACAATGGTTGAAAATGT
ATCTCCCGCCATCGTCGGTATTTCAAACTATCAAAAACAAACAGAGAGCGGTATGTTCGGTTTTGAAAGCAACAGCAGCA
GCTCAAGCGAACAAGAAACAGGCACAGGCTCAGGTGTCATCTATAAAAAAGCAAACGGCAAAGCATACATTATTACAAAT
AACCACGTTGTCGAAGGCGCGTCTAAACTGACGGTTTCCCTGTCCAACGGCAAAGAAGTGGAAGGTAAATTGCTGGGCAG
CGATTCGTTGACAGACCTTGCCGTTGTTAAAATTTCCGCTGATCACGTGGAAAAAGTCGCCTCTTTCGGCGATTCGTCAA
GCTTGAAAGCAGGCGAATCGGTGATCGCTATTGGAAACCCGCTCGGCAAAGATCTGTCCCGCACGGTGACACAAGGCATC
ATCAGCGGTGTTGATCGGACCGTTTCCGTAGATACATCCGCAGGCCAAACCGAGATGAACGTCATTCAAACCGACGCGGC
CATCAACCCCGGCAACAGCGGAGGCGCCCTTTTGAATACAAAGGGTGAAGTGATCGGCATCAACAGCATGAAAATCAGTG
AAAGCGGAGTAGAAGGCATCGGATTTGCGATTCCAAGCAATGATGTCAAACCGATTGCAGAAGAGCTGATGTCTAAAGGA
AAAATTGAGCGCCCGTTCATCGGAATCGGCATGATGGATCTTGAGCAGGTGCCGGAAAACTATCAAACAGGCACCCTCGG
ATTAAGCGGCAGCCAGTTAAACAAAGGCGTCTACATCCGCCAGGTCGCTTCAGGCTCCCCAGCTGAAAAAGCGGGCCTTA
AAGAGAACGATGTCATCGTCAGCTTTAACGGAAAAGAAACCGATACAGGAAGCGCGCTGCGCAACCTTCTTTACAACGAT
GCAAAAATCGGGGATACGGTAAAGGTTACCCTCATTCGAAACGGCAAAACCATGACAAAACAAATCACCCTTGACCAGAA
AGAATCCGCATCATCTTAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(68-429)

PDZ domain (PDZ_2)

(327-424)

Trypsin-like peptidase domain (Trypsin_2)

(143-287)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

42.289

93.056

0.394
  htrA Streptococcus gordonii str. Challis substr. CH1

38.971

94.444

0.368
  htrA Streptococcus mitis NCTC 12261

44.011

83.102

0.366