Detailed information NTG0236893

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: C7A17_RS01515
• Genome accession: NZ_CP027657
• Coordinates: 302690..304912 (-)
• Length: 740 a.a.
• NCBI ID: WP_106736343.1
• Uniprot ID: -
• Organism: Ectopseudomonas mendocina strain NEB698
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 297690..309912

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7A17_RS01480 (C7A17_01480)	murB	298056..299075 (-)	1020	WP_106736337.1	UDP-N-acetylmuramate dehydrogenase	-
C7A17_RS01485 (C7A17_01485)	-	299072..299536 (-)	465	WP_106736338.1	low molecular weight protein-tyrosine-phosphatase	-
C7A17_RS01490 (C7A17_01490)	kdsB	299536..300300 (-)	765	WP_106736339.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
C7A17_RS01495 (C7A17_01495)	-	300301..300486 (-)	186	WP_013714804.1	Trm112 family protein	-
C7A17_RS01500 (C7A17_01500)	lpxK	300506..301510 (-)	1005	WP_106736340.1	tetraacyldisaccharide 4'-kinase	-
C7A17_RS01505 (C7A17_01505)	-	301511..301939 (-)	429	WP_106736341.1	biopolymer transporter ExbD	-
C7A17_RS01510 (C7A17_01510)	exbB	301936..302619 (-)	684	WP_106736342.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
C7A17_RS01515 (C7A17_01515)	comA	302690..304912 (-)	2223	WP_106736343.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
C7A17_RS01520 (C7A17_01520)	-	304987..306231 (-)	1245	WP_106736344.1	lipoprotein-releasing ABC transporter permease subunit	-
C7A17_RS01525 (C7A17_01525)	lolD	306231..306932 (-)	702	WP_106736345.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
C7A17_RS01530 (C7A17_01530)	-	306937..308184 (-)	1248	WP_106736346.1	lipoprotein-releasing ABC transporter permease subunit	-
C7A17_RS01535 (C7A17_01535)	-	308324..308890 (+)	567	WP_106736347.1	PilZ domain-containing protein	-
C7A17_RS01540 (C7A17_01540)	-	308912..309220 (+)	309	WP_106736348.1	phosphodiesterase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 79942.03 Da
• Isoelectric Point: 9.0431

>NTDB_id=236893 C7A17_RS01515 WP_106736343.1 302690..304912(-) (comA) [Ectopseudomonas mendocina strain NEB698]
MRAGMLALALGLLSLRFLPALPPAWLLLVCAALGLALLASRLYLIGFFLLGMAWACTSAQWALDDRLAPALDGRTLWLEG
QVVGLPAVANGVVRFQLEDALSRRGELPQLIRLSWRNGPEIRGGERWRLAVSLRQPHGLVNPQAFDYEAWLLAQRIGATG
TVKTGQRLSEAGGLGAWRDQVRQHLLEVEAFGRAGGLAALVLGDGSGLSTADWRLLQHTGTVHLMVISGQHITMLAGLLY
GLVAGLARLGLWPRRWPWLPCACVLALSGALAYGLMAGFEVPVRRACVMIALVLLWRLRFRHLGVWWPLLLALVVVLLAE
PLAVLQPGFWLSFAAVAVLIVVFAGRLGSWSAWRSLGRAQWTMAFGLLPAMLALGLPVSASGPLANLIAVPWVGVLVVPL
ALLGTLLLPIPWLGEGLLTLAGGLLALLFLMLGQIASWLPAWLPSSVPWWALLLAVLGAALLLLPSGVPLRLPGLFLLLP
ALLVQSKPVPHGLAQVWVFDVGQGLSVLVRTREHALLYDAGPSFGDFDMGERVVLPSLRALDVRRLDLLLLSHADNDHAG
GAGAIVDGLPVALVRSGEVERLAPGLQAEPCTAQRWQWDDVEFQLWRWAEGGPGNPSSCVLRVSAQGESLLLTGDIDSRT
ERALLGSELPAQAEWLLVPHHGSRSSSSPGFLNAVAPHGGLLSRGRHNSFGHPHPQVVARYIARDVVLHDTAEQGALMLW
LGTYGEVNGLREQRRFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=236893 C7A17_RS01515 WP_106736343.1 302690..304912(-) (comA) [Ectopseudomonas mendocina strain NEB698]
ATGCGCGCAGGGATGCTGGCGCTCGCTTTGGGCTTATTGTCACTTCGATTCCTTCCGGCATTGCCGCCAGCCTGGTTGTT
GCTCGTTTGTGCAGCGCTGGGCCTTGCACTGTTGGCCTCTCGCCTCTACCTAATCGGTTTTTTCCTGCTGGGCATGGCCT
GGGCCTGCACCTCGGCGCAGTGGGCGCTGGATGATCGACTGGCGCCAGCGCTCGATGGCCGCACCCTGTGGTTGGAAGGG
CAGGTGGTCGGGTTGCCAGCCGTCGCCAATGGCGTGGTGCGTTTTCAGCTCGAAGATGCGTTGTCACGTCGCGGCGAACT
GCCGCAACTGATCCGCCTGTCCTGGCGCAATGGGCCGGAGATTCGCGGTGGGGAGCGCTGGCGTCTGGCGGTCAGTCTGC
GTCAACCCCATGGTCTGGTGAATCCGCAGGCCTTCGACTACGAGGCCTGGTTGCTGGCGCAGCGCATCGGGGCCACCGGT
ACGGTCAAGACCGGGCAGCGCCTGAGCGAGGCGGGTGGGCTGGGGGCCTGGCGTGATCAGGTGCGTCAGCATCTGCTCGA
GGTGGAGGCCTTCGGCCGCGCCGGCGGTCTTGCCGCGCTGGTGCTGGGTGACGGTTCGGGCCTGAGCACCGCCGACTGGC
GTCTGTTGCAGCATACCGGCACGGTGCATCTGATGGTCATTTCCGGTCAGCACATCACCATGCTGGCCGGTCTGCTCTAT
GGTCTGGTGGCAGGCTTGGCCCGCCTGGGCTTGTGGCCGCGACGTTGGCCTTGGTTGCCCTGTGCCTGCGTGTTGGCATT
GAGTGGGGCTCTGGCCTACGGACTGATGGCTGGTTTCGAGGTGCCGGTGCGGCGTGCTTGCGTGATGATCGCGCTGGTGC
TGCTGTGGCGTTTGCGCTTCCGTCATCTGGGTGTCTGGTGGCCATTGCTGCTGGCGTTGGTGGTGGTGCTGCTGGCCGAG
CCACTAGCGGTGTTGCAGCCAGGCTTCTGGTTGTCGTTCGCTGCGGTTGCCGTGCTGATAGTGGTCTTCGCGGGGCGCCT
GGGTAGTTGGAGTGCCTGGCGGAGTCTGGGGCGTGCGCAGTGGACAATGGCTTTCGGCCTGTTGCCAGCGATGTTGGCGT
TGGGGTTGCCGGTCAGCGCCAGCGGGCCGTTGGCCAATCTGATTGCCGTGCCCTGGGTGGGTGTACTGGTTGTGCCGCTA
GCCTTGCTGGGAACACTGCTGCTGCCCATTCCCTGGTTGGGTGAAGGGTTGCTGACGCTGGCGGGCGGGTTGTTGGCGCT
GCTGTTTCTCATGCTGGGACAGATCGCGTCGTGGTTGCCAGCCTGGCTGCCGTCGAGTGTGCCCTGGTGGGCGTTGCTGC
TGGCTGTGTTGGGAGCAGCCTTGTTGCTGCTGCCATCGGGCGTGCCGTTGCGTCTGCCCGGGTTGTTTCTATTGCTGCCG
GCACTGCTCGTGCAGAGCAAGCCTGTGCCACATGGGTTGGCGCAGGTATGGGTATTCGATGTAGGGCAGGGCCTGTCGGT
GCTGGTGCGTACCCGTGAGCACGCGCTGCTCTACGATGCAGGGCCGAGTTTCGGTGACTTCGACATGGGTGAGCGTGTGG
TCTTGCCGTCGTTGCGTGCGCTCGATGTGCGGCGCCTGGATTTGCTGCTGCTCAGTCACGCTGACAATGATCATGCTGGC
GGGGCCGGTGCCATCGTTGATGGCTTGCCCGTTGCCCTGGTGCGCAGTGGCGAGGTGGAGCGCCTGGCGCCTGGACTGCA
GGCCGAACCCTGTACCGCTCAGCGCTGGCAGTGGGATGACGTCGAGTTTCAGCTGTGGCGCTGGGCTGAGGGCGGGCCGG
GTAACCCGAGTTCCTGCGTCCTGCGGGTCAGTGCCCAGGGCGAGAGCCTGCTGCTGACTGGCGACATCGACAGTCGCACC
GAGCGGGCATTGCTGGGCAGTGAGCTACCAGCCCAGGCTGAATGGCTGCTGGTGCCGCACCATGGTAGCCGCAGCTCATC
GAGCCCGGGCTTTCTCAACGCTGTCGCGCCGCATGGCGGGCTGTTGTCGCGTGGCCGGCACAACAGCTTCGGTCATCCCC
ACCCTCAGGTGGTGGCGCGTTATATCGCGCGTGACGTGGTGTTGCACGATACCGCTGAGCAGGGCGCTCTGATGCTATGG
CTGGGCACTTATGGAGAGGTCAACGGCTTGCGTGAGCAAAGGCGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterProScan.

• Competence protein (Competence) (200-465)

• Domain of unknown function (DUF4131) (DUF4131) (22-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-666)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	65.734	96.622	0.635
comA	Ralstonia pseudosolanacearum GMI1000	36.375	100	0.409