Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxQ   Type   Regulator
Locus tag   CEJ46_RS17765 Genome accession   NZ_CP022102
Coordinates   678210..680756 (-) Length   848 a.a.
NCBI ID   WP_088721555.1    Uniprot ID   -
Organism   Vibrio anguillarum strain JLL237     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context


Location: 673210..685756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEJ46_RS17740 (CEJ46_17740) - 673715..673939 (+) 225 WP_064626222.1 hypothetical protein -
  CEJ46_RS17745 (CEJ46_17745) - 674007..674306 (+) 300 WP_013867906.1 hypothetical protein -
  CEJ46_RS17750 (CEJ46_17750) - 674394..675653 (+) 1260 WP_064626223.1 hydroxymethylglutaryl-CoA reductase -
  CEJ46_RS17755 (CEJ46_17755) glpD 675839..677383 (+) 1545 WP_064626224.1 glycerol-3-phosphate dehydrogenase -
  CEJ46_RS17760 (CEJ46_17760) - 677527..678192 (+) 666 WP_064626225.1 PilZ domain-containing protein -
  CEJ46_RS17765 (CEJ46_17765) luxQ 678210..680756 (-) 2547 WP_088721555.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ Regulator
  CEJ46_RS17770 (CEJ46_17770) luxP 680772..681872 (-) 1101 WP_064626227.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  CEJ46_RS17775 (CEJ46_17775) - 682097..683248 (-) 1152 WP_017046397.1 conjugal transfer protein TraF -
  CEJ46_RS17780 (CEJ46_17780) - 683344..683667 (-) 324 WP_064626228.1 GIY-YIG nuclease family protein -
  CEJ46_RS17785 (CEJ46_17785) - 683668..684321 (-) 654 WP_064626229.1 YceH family protein -
  CEJ46_RS17790 (CEJ46_17790) - 684379..684582 (-) 204 WP_026028336.1 hypothetical protein -
  CEJ46_RS17795 (CEJ46_17795) - 684773..685090 (+) 318 WP_010319897.1 DUF496 family protein -
  CEJ46_RS17800 (CEJ46_17800) - 685400..685651 (+) 252 WP_013867916.1 YgjV family protein -

Sequence


Protein


Download         Length: 848 a.a.        Molecular weight: 96115.79 Da        Isoelectric Point: 5.0898

>NTDB_id=236799 CEJ46_RS17765 WP_088721555.1 678210..680756(-) (luxQ) [Vibrio anguillarum strain JLL237]
MSLRSSTVKKKQKIATVITKSMIAVIGALTLSVLFQSYQISSKIIAQEVQRTASQTSSLIQNLFNFRLSLLQINQDSSAK
NAGLVKAIRKGDNDSIDQFFFGVDQLEVANTPDIRFISDSDSLMWEDGNAQFYGIEQNELVNMSRKVALSNNWHMIKSPS
QLGYAYLMVRRTPVIDSQSGEVIGFLHLATVLNNNYVLAETLREGSNSENLVMTTGEKVLASTINGDETYTERDVLEDNF
DAYSFADYMVSRTALTIEGVPIYINVLSVQSNENVLQLRENYFFWMIFALFAMVIVSILTRWWLQQRVKNEISSLMNYTH
KAAEAGSYELFSGSKIYEFDHFGRTLEHTFQRLSEQEKQFEDLFNFSLSPIIVWSIDGDIIKMNPSAKKYFMRRNDQQQC
ILDALKQELQPKIRLAVEQETFREINVEVGNKVFRWNLSPIIFEQRIESIITQGQDITTIAEAAKQSRLARQEAEESARI
RAEFLAKMSHELRTPLNGILGVSQLLKREISDHEQLEQVNVLCSSGEHLLAVLNDILDFSKIEQGQFRIQESDFKLVEVI
SAVESIYRPLCAEKEIEFSLKSNIPPDMMIHSDQVRLNQILFNLLNNATKFTHNGLISIEFQQKNNHQLFISISDTGIGI
REQDLALIFEPFTQVESNTTREYGGSGLGLAIVKSLIEMLGGAVNVKSQFGLGTTFSVELPLVVVSDCGKDIPSYERAPP
HEMFEKPIKVLLVEDNHTNAFIAQAFCKKYGMEVTRVEDGLQAIDYVKDHPVDLILMDNQLPYLGGVETTHLIKHELMMD
VPIYACTADGMQSTNEAFMAAGAEYVIVKPIKEKALHEAFCHFQKRQK

Nucleotide


Download         Length: 2547 bp        

>NTDB_id=236799 CEJ46_RS17765 WP_088721555.1 678210..680756(-) (luxQ) [Vibrio anguillarum strain JLL237]
ATGAGTTTAAGGTCAAGCACCGTCAAGAAAAAACAAAAGATAGCTACCGTGATCACCAAATCAATGATTGCGGTGATTGG
CGCATTGACGCTCAGCGTTTTATTTCAAAGTTATCAGATCAGTAGCAAAATCATTGCTCAAGAAGTGCAACGTACGGCTT
CTCAAACCTCTAGTCTCATCCAGAACCTCTTTAACTTCCGCCTTTCATTACTGCAGATAAACCAAGATAGCAGCGCAAAA
AATGCAGGTTTAGTTAAAGCAATTCGTAAGGGCGATAATGACAGTATTGATCAGTTCTTTTTTGGAGTTGACCAGCTAGA
AGTAGCCAACACGCCTGACATTCGTTTCATTTCTGATTCTGACAGCCTGATGTGGGAAGATGGCAATGCTCAGTTTTATG
GTATTGAACAAAACGAGCTGGTAAACATGTCTCGTAAAGTCGCGTTAAGTAATAACTGGCATATGATCAAATCTCCCTCT
CAATTGGGCTATGCCTACCTAATGGTCAGACGTACTCCCGTTATTGACTCGCAGTCCGGAGAGGTGATTGGTTTTTTGCA
TCTTGCTACCGTACTTAACAACAATTACGTGCTGGCAGAAACATTACGTGAAGGGAGTAACTCAGAAAATCTCGTGATGA
CGACGGGTGAAAAGGTCTTAGCCTCAACAATTAATGGTGATGAGACCTACACGGAACGTGATGTTTTAGAAGATAATTTT
GACGCCTATAGTTTTGCCGATTACATGGTAAGCCGTACCGCGTTAACCATAGAAGGCGTACCAATTTATATTAACGTCCT
CAGTGTGCAGAGCAATGAGAACGTATTGCAATTACGTGAAAATTATTTTTTTTGGATGATTTTTGCCCTTTTTGCGATGG
TGATAGTCTCTATTTTGACACGTTGGTGGTTACAGCAGCGTGTCAAAAATGAAATCAGTAGCTTGATGAATTACACCCAC
AAAGCTGCAGAAGCTGGGAGTTATGAGCTTTTTTCTGGTTCTAAAATCTATGAATTTGATCACTTCGGCAGAACGCTAGA
ACACACATTTCAACGTTTATCTGAGCAAGAAAAACAATTTGAAGATCTGTTCAATTTTTCACTTTCGCCCATCATAGTAT
GGAGTATCGACGGTGATATCATCAAAATGAACCCATCAGCAAAGAAATATTTCATGCGTCGCAATGATCAACAGCAATGC
ATTCTTGATGCATTAAAGCAAGAACTGCAGCCAAAGATACGCCTTGCGGTTGAACAGGAAACGTTCCGAGAGATAAACGT
TGAAGTTGGCAATAAGGTTTTTCGCTGGAATTTATCGCCCATTATTTTTGAGCAGAGAATTGAGTCAATCATCACTCAAG
GACAAGATATTACGACAATCGCTGAGGCGGCCAAACAGAGCCGACTAGCAAGGCAGGAAGCGGAAGAGTCGGCGCGTATT
CGTGCTGAATTTCTTGCAAAAATGAGCCATGAGCTGAGAACACCATTGAATGGAATTTTAGGTGTTTCTCAATTACTTAA
GCGTGAAATCAGTGACCATGAGCAACTTGAACAAGTGAATGTGTTATGCAGTAGTGGTGAACATTTATTGGCGGTGCTGA
ATGATATCCTTGATTTTTCAAAGATAGAGCAGGGACAGTTTAGAATTCAAGAGTCTGACTTTAAGCTGGTTGAGGTCATC
TCTGCCGTGGAAAGTATCTATCGGCCATTATGTGCCGAAAAAGAGATTGAGTTCAGCCTAAAGAGCAATATTCCGCCTGA
TATGATGATCCATAGCGATCAAGTCCGCCTGAACCAAATTCTGTTTAATTTATTAAATAATGCGACTAAGTTTACCCATA
ATGGGTTGATTAGCATTGAGTTCCAGCAAAAGAATAACCACCAATTGTTTATTTCGATTAGTGATACAGGTATCGGCATC
AGAGAGCAAGATCTCGCGCTTATTTTTGAGCCTTTTACTCAAGTAGAATCAAACACCACACGAGAATACGGCGGTAGTGG
TTTGGGGCTTGCGATTGTCAAAAGCTTAATTGAGATGCTTGGTGGTGCCGTAAACGTGAAAAGCCAATTTGGACTAGGTA
CTACATTTTCTGTTGAACTCCCGTTGGTTGTCGTCAGTGACTGCGGGAAGGATATACCATCTTATGAGCGCGCGCCGCCA
CATGAAATGTTTGAAAAACCAATCAAAGTGTTGCTAGTCGAAGATAATCATACCAACGCTTTTATTGCTCAAGCATTTTG
CAAAAAATACGGTATGGAAGTGACAAGAGTAGAGGATGGTCTACAGGCGATTGATTATGTGAAAGATCATCCAGTGGATC
TTATATTAATGGATAACCAACTGCCTTACTTAGGTGGGGTTGAAACAACACATTTGATCAAACATGAGTTGATGATGGAT
GTACCTATTTATGCGTGTACAGCTGATGGTATGCAATCGACTAACGAAGCATTTATGGCCGCAGGTGCAGAGTATGTGAT
AGTTAAACCTATCAAAGAGAAAGCATTGCATGAAGCTTTTTGTCACTTCCAAAAACGGCAGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxQ Vibrio cholerae strain A1552

56.316

99.882

0.562


Multiple sequence alignment