Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   CEQ14_RS07530 Genome accession   NZ_CP022056
Coordinates   1508374..1509003 (+) Length   209 a.a.
NCBI ID   WP_105577666.1    Uniprot ID   -
Organism   Staphylococcus saprophyticus strain FDAARGOS_336     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1503374..1514003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEQ14_RS07505 (CEQ14_07530) - 1504223..1505209 (-) 987 WP_002482841.1 aromatic acid exporter family protein -
  CEQ14_RS07510 (CEQ14_07535) map 1505384..1506136 (+) 753 WP_011302778.1 type I methionyl aminopeptidase -
  CEQ14_RS07515 (CEQ14_07540) - 1506240..1506626 (+) 387 WP_011302779.1 hypothetical protein -
  CEQ14_RS07520 (CEQ14_07545) liaF 1506643..1507344 (+) 702 WP_011302780.1 cell wall-active antibiotics response protein LiaF -
  CEQ14_RS07525 (CEQ14_07550) vraS 1507341..1508384 (+) 1044 WP_011302781.1 sensor histidine kinase Regulator
  CEQ14_RS07530 (CEQ14_07555) vraR 1508374..1509003 (+) 630 WP_105577666.1 response regulator transcription factor Regulator
  CEQ14_RS07535 (CEQ14_07560) - 1509160..1510332 (-) 1173 WP_011302782.1 YihY/virulence factor BrkB family protein -
  CEQ14_RS07540 (CEQ14_07565) - 1510744..1511028 (-) 285 WP_002482848.1 hypothetical protein -
  CEQ14_RS07545 (CEQ14_07570) - 1511035..1511499 (-) 465 WP_011302783.1 low molecular weight protein-tyrosine-phosphatase -
  CEQ14_RS07550 (CEQ14_07575) - 1511634..1511837 (+) 204 WP_002482850.1 DUF1128 family protein -
  CEQ14_RS07555 (CEQ14_07580) - 1511851..1513089 (+) 1239 WP_011302784.1 aminopeptidase -
  CEQ14_RS07560 (CEQ14_07585) - 1513303..1513824 (+) 522 WP_011302785.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23641.16 Da        Isoelectric Point: 4.6191

>NTDB_id=236256 CEQ14_RS07530 WP_105577666.1 1508374..1509003(+) (vraR) [Staphylococcus saprophyticus strain FDAARGOS_336]
MPIKVLFVDDHEMVRIGISSYLSTQSDIDVVGEGKSGKDAIEKAHELKPDLILMDLLMDDMDGVEATEQVKKDLPNIKVV
MLTSYIEDNEVYLALDSGVDSYILKTTSASDIAEAIRKTYNNESVFEAEVLVKMRNRMKQRAELYEMLTEREMEILLLIA
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ

Nucleotide


Download         Length: 630 bp        

>NTDB_id=236256 CEQ14_RS07530 WP_105577666.1 1508374..1509003(+) (vraR) [Staphylococcus saprophyticus strain FDAARGOS_336]
ATGCCGATTAAAGTATTATTTGTTGATGATCATGAAATGGTTCGAATAGGTATTTCTAGTTATTTATCCACACAATCAGA
TATAGATGTCGTAGGGGAAGGTAAGTCAGGAAAAGATGCAATCGAAAAAGCACATGAACTGAAACCGGACCTAATTTTAA
TGGATTTACTTATGGACGATATGGATGGTGTCGAAGCAACTGAACAAGTTAAAAAAGACTTGCCAAATATTAAAGTTGTC
ATGCTTACGAGTTATATTGAAGATAACGAAGTCTATCTTGCACTTGATTCCGGTGTAGATAGCTATATATTGAAAACAAC
AAGTGCTAGTGATATTGCTGAAGCGATTCGTAAGACTTACAATAATGAGTCAGTATTTGAAGCAGAAGTCCTAGTTAAAA
TGAGAAATAGGATGAAACAACGAGCTGAATTGTATGAAATGCTCACAGAACGTGAAATGGAGATTTTATTACTGATTGCT
AAAGGTTACTCTAACCAAGAGATTGCCAGCGCTTCACATATTACGATTAAAACAGTGAAAACGCATGTAAGTAATATCCT
AAGTAAATTAGAAGTTCAAGATAGAACTCAAGCCGTCATATATGCATTCCAGCACAATTTAATTCAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(147-202)

Response regulator receiver domain (Response_reg)

(5-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

89.474

100

0.895

Multiple sequence alignment