Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   CEG11_RS01945 Genome accession   NZ_CP021976
Coordinates   383205..383324 (+) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain T20E-257     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 378205..388324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEG11_RS01930 (CEG11_01930) - 379818..380500 (+) 683 Protein_340 winged helix-turn-helix domain-containing protein -
  CEG11_RS01935 (CEG11_01935) - 380487..381920 (+) 1434 WP_162130794.1 sensor histidine kinase -
  CEG11_RS01940 (CEG11_01940) rapC 382073..383221 (+) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  CEG11_RS01945 (CEG11_01945) phrC 383205..383324 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  CEG11_RS01950 (CEG11_01950) - 383474..383584 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  CEG11_RS01955 (CEG11_01955) - 383664..385028 (-) 1365 WP_003156333.1 aspartate kinase -
  CEG11_RS01965 (CEG11_01965) ceuB 385443..386396 (+) 954 WP_003156332.1 ABC transporter permease Machinery gene
  CEG11_RS01970 (CEG11_01970) - 386386..387333 (+) 948 WP_003156331.1 iron chelate uptake ABC transporter family permease subunit -
  CEG11_RS01975 (CEG11_01975) - 387327..388085 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=235471 CEG11_RS01945 WP_003156334.1 383205..383324(+) (phrC) [Bacillus velezensis strain T20E-257]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=235471 CEG11_RS01945 WP_003156334.1 383205..383324(+) (phrC) [Bacillus velezensis strain T20E-257]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718

Multiple sequence alignment