Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CD200_RS02365 Genome accession   NZ_CP021970
Coordinates   469459..470412 (+) Length   317 a.a.
NCBI ID   WP_061565963.1    Uniprot ID   A0A8B5YEJ1
Organism   Bacillus licheniformis strain CBA7132     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 464459..475412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CD200_RS02350 (CD200_02355) - 464523..465950 (+) 1428 WP_009330185.1 HAMP domain-containing sensor histidine kinase -
  CD200_RS22085 - 465983..466774 (-) 792 WP_009330184.1 methyl-accepting chemotaxis protein -
  CD200_RS22090 - 466789..467688 (-) 900 WP_009330183.1 methyl-accepting chemotaxis protein -
  CD200_RS02360 (CD200_02365) - 467824..469185 (-) 1362 WP_009330182.1 aspartate kinase -
  CD200_RS02365 (CD200_02370) ceuB 469459..470412 (+) 954 WP_061565963.1 ABC transporter permease Machinery gene
  CD200_RS02370 (CD200_02375) - 470402..471346 (+) 945 WP_003178939.1 iron chelate uptake ABC transporter family permease subunit -
  CD200_RS02375 (CD200_02380) - 471346..472104 (+) 759 WP_003178940.1 ABC transporter ATP-binding protein -
  CD200_RS02380 (CD200_02385) - 472119..473066 (+) 948 WP_003178942.1 siderophore ABC transporter substrate-binding protein -
  CD200_RS02385 (CD200_02390) - 473235..474656 (-) 1422 WP_003178944.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35245.68 Da        Isoelectric Point: 10.1282

>NTDB_id=235318 CD200_RS02365 WP_061565963.1 469459..470412(+) (ceuB) [Bacillus licheniformis strain CBA7132]
MKLRYLLLMLIILSFSSIFIGVKELSPLDLFRFNEDEIQTLYISRIPRLISIVLAGMSLSICGLIMQQLTRNKFVSPTTA
GTMDWARLGVIIAIVLFSSAGIVVKILFAFVFALFGSFLFVKILDRIKFKDAIFIPLVGMMLGSVVSAIYTFMAYQYNII
QNVNAWFEGNFSLVMKGRYELLFLSIPLVIIAYLFANKFTLAGMGESFSINLGLKYKRVVNIGLIIVSIISSVVILTIGT
LPFLGLIIPNIVSIYRGDHLKNSLPHTAVLGAVFVLFCDIAGRLVIYPYEISVGLMVGIIGSGVFLYLLLRRKAYAS

Nucleotide


Download         Length: 954 bp        

>NTDB_id=235318 CD200_RS02365 WP_061565963.1 469459..470412(+) (ceuB) [Bacillus licheniformis strain CBA7132]
ATGAAATTACGATACCTATTGCTAATGCTCATCATTCTTTCATTCAGCTCGATATTCATCGGCGTTAAGGAGCTTTCGCC
TCTTGACCTTTTCCGCTTTAATGAGGACGAAATTCAAACGCTTTACATAAGCAGAATCCCGCGCTTGATCAGCATCGTGC
TTGCGGGAATGAGCTTGAGCATCTGCGGGCTGATCATGCAGCAGCTGACGCGCAATAAATTTGTTTCACCAACCACCGCT
GGAACGATGGATTGGGCTCGGCTCGGCGTGATCATTGCGATCGTGCTTTTTTCGTCTGCAGGGATAGTAGTCAAAATACT
GTTTGCCTTTGTTTTTGCACTGTTTGGCAGCTTTTTGTTCGTCAAAATTTTGGACAGAATCAAGTTCAAAGATGCGATTT
TCATCCCTCTCGTCGGAATGATGCTCGGGAGCGTTGTCAGCGCCATCTATACTTTCATGGCTTATCAGTACAATATTATT
CAAAACGTCAATGCATGGTTTGAAGGGAATTTTTCGCTGGTCATGAAGGGGAGGTATGAGCTCTTATTTCTGAGTATACC
GCTCGTTATCATTGCCTATCTGTTCGCCAATAAATTCACGTTGGCCGGGATGGGGGAGTCATTTTCCATCAATCTTGGTT
TGAAATACAAGCGGGTGGTCAATATCGGGCTGATCATCGTATCTATTATTTCGTCCGTCGTCATCCTGACGATCGGCACG
CTTCCCTTTTTGGGATTGATCATCCCGAACATCGTGTCCATTTACAGGGGAGATCATTTGAAAAACAGCCTGCCTCACAC
GGCGGTTCTCGGAGCCGTTTTCGTCTTGTTTTGCGATATAGCGGGACGTCTCGTCATTTACCCGTACGAAATTTCGGTTG
GTTTGATGGTCGGCATCATCGGGAGCGGCGTTTTTCTTTACTTGCTTTTAAGGAGAAAAGCCTATGCGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A8B5YEJ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.266

99.685

0.511

Multiple sequence alignment