Detailed information NTG0234991

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: S101392_RS18420
• Genome accession: NZ_CP021921
• Coordinates: 3567718..3568440 (-)
• Length: 240 a.a.
• NCBI ID: WP_024572693.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SRCM101392
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3562718..3573440

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101392_RS18385 (S101392_03641)	fliW	3562857..3563288 (-)	432	WP_003228007.1	flagellar assembly protein FliW	-
S101392_RS18390 (S101392_03642)	yviE	3563309..3563884 (-)	576	WP_014481045.1	DUF6470 family protein	-
S101392_RS18395 (S101392_03643)	flgL	3563931..3564827 (-)	897	WP_015714797.1	flagellar hook-associated protein FlgL	-
S101392_RS18400 (S101392_03644)	flgK	3564838..3566361 (-)	1524	WP_088327073.1	flagellar hook-associated protein FlgK	-
S101392_RS18405 (S101392_03645)	flgN	3566380..3566862 (-)	483	WP_003227999.1	flagellar protein FlgN	-
S101392_RS18410 (S101392_03646)	flgM	3566878..3567144 (-)	267	WP_003227997.1	flagellar biosynthesis anti-sigma factor FlgM	-
S101392_RS18415 (S101392_03647)	yvyF	3567225..3567644 (-)	420	WP_024572694.1	TIGR03826 family flagellar region protein	-
S101392_RS18420 (S101392_03648)	comFC	3567718..3568440 (-)	723	WP_024572693.1	comF operon protein ComFC	Machinery gene
S101392_RS18425 (S101392_03649)	comFB	3568404..3568700 (-)	297	WP_015483764.1	late competence protein ComFB	-
S101392_RS18430 (S101392_03650)	comFA	3568760..3570151 (-)	1392	WP_088327075.1	ATP-dependent helicase ComFA	Machinery gene
S101392_RS18435 (S101392_03651)	fakBA	3570257..3571102 (-)	846	WP_076457520.1	DegV family protein	-
S101392_RS18440 (S101392_03652)	degU	3571200..3571889 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
S101392_RS18445 (S101392_03653)	degS	3571972..3573129 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 27505.79 Da
• Isoelectric Point: 9.3154

>NTDB_id=234991 S101392_RS18420 WP_024572693.1 3567718..3568440(-) (comFC) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRD
SLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAQLLAECL
DRPSHHPLIRLNNEKQSKKKKTERLLSERIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVASFTLIRS

Nucleotide

• Length: 723 bp

>NTDB_id=234991 S101392_RS18420 WP_024572693.1 3567718..3568440(-) (comFC) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGTCAAACGAAGCAGGAGGAGGCATTCATAAACTGATCTGTTTATTATGTGATTCGCAATTTTCTCAAGATGTTACATG
GAGAGCCCTTTTTTTATTAAAGCCTGATGAAAAGGTTTGTTATTCTTGCAGAAGCAAATTAAAGAAAATCACAGGACATA
TCTGCCCCCTGTGCGGCAGACCTCAATCTGTTCATGCCGTATGCAGGGATTGCGAGGTGTGGAGAACAAGGATCAGAGAC
AGTTTGCTATTGCGTCAAAACCGTTCAGTTTACACATATAATGATATGATGAAAGAAACGCTCTCCCGTTTTAAATTTAG
AGGAGATGCAGAAATCATAAATGCATTTAAAAGTGATTTTTCTTCAACCTTTTCTAAGGTTTACCCCGATAAGCATTTTG
TTCTTGTACCTATTCCGCTGAGCAAGGAACGGGAAGAAGAGCGCGGATTTAACCAGGCACAGCTCTTGGCAGAATGTTTA
GACCGGCCTTCCCACCATCCCCTCATTCGCCTGAATAATGAGAAACAGTCAAAGAAAAAGAAAACAGAACGCCTGCTGTC
AGAGCGCATTTTTGATACGAAAAATAATTCAGCAGAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCG
CCACCTTGCACTTCGCAGCCCGCTGCTTATTAGAAAAAGGAAAAGCCGCTTCAGTGGCATCTTTTACCTTGATCAGAAGC
TAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	98.75	100	0.988