Detailed information NTG0234831

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: CDO84_RS17245
• Genome accession: NZ_CP021911
• Coordinates: 3404287..3405444 (-)
• Length: 385 a.a.
• NCBI ID: WP_014665563.1
• Uniprot ID: -
• Organism: Bacillus sp. MD-5
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3399287..3410444

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDO84_RS17215 (CDO84_17215)	-	3399539..3399958 (-)	420	WP_014665558.1	TIGR03826 family flagellar region protein	-
CDO84_RS17220 (CDO84_17220)	comFC	3400032..3400754 (-)	723	WP_040081665.1	amidophosphoribosyltransferase	Machinery gene
CDO84_RS17225 (CDO84_17225)	comFB	3400718..3401014 (-)	297	WP_014665560.1	late competence protein ComFB	-
CDO84_RS17230 (CDO84_17230)	comFA	3401083..3402465 (-)	1383	WP_040081664.1	DEAD/DEAH box helicase	Machinery gene
CDO84_RS17235 (CDO84_17235)	-	3402572..3403417 (-)	846	WP_040081663.1	DegV family protein	-
CDO84_RS17240 (CDO84_17240)	degU	3403515..3404204 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
CDO84_RS17245 (CDO84_17245)	degS	3404287..3405444 (-)	1158	WP_014665563.1	two-component sensor histidine kinase DegS	Regulator
CDO84_RS17250 (CDO84_17250)	-	3405661..3406314 (+)	654	WP_014665564.1	YigZ family protein	-
CDO84_RS17255 (CDO84_17255)	tagV	3406314..3407489 (+)	1176	WP_040081662.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
CDO84_RS17260 (CDO84_17260)	-	3407561..3408637 (-)	1077	WP_014665566.1	MraY family glycosyltransferase	-
CDO84_RS17265 (CDO84_17265)	-	3408782..3409975 (-)	1194	WP_082032968.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44943.69 Da
• Isoelectric Point: 6.0610

>NTDB_id=234831 CDO84_RS17245 WP_014665563.1 3404287..3405444(-) (degS) [Bacillus sp. MD-5]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TNDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=234831 CDO84_RS17245 WP_014665563.1 3404287..3405444(-) (degS) [Bacillus sp. MD-5]
ATGAATAAAACAAAGATGGATTCCAAAGTGTTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAACTGAAACAAATTAAGCAGCAGG
TGTATGAAGTGATCGAGCTTGGAGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGATGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATCGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTTAATTACTTGAATCAGGATCTGCGCGAAGTCGGACTGCTTCTT
GCAGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTTTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GTGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGTCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAAGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGTATTGGAGAAACAGAGGATCAGCGGCTAGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAAATC
ACAAATGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.74	100	0.997